RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 IRF3Q14653 427 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 MOGQ16653 247 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 ODF4Q2M2E3 257 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 CCDC58Q4VC31 144 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 ZNF773Q6PK81 442 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 DOK3Q7L591 496 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 KLBQ86Z14 1044 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 LILRB2Q8N423 598 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 FTMTQ8N4E7 242 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 ZNF676Q8N7Q3 588 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 STPG3Q8N7X2 389 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 ZNF485Q8NCK3 441 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 OR10AD1Q8NGE0 317 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 RPS4Y2Q8TD47 263 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 CHAC2Q8WUX2 184 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 DVL3Q92997 716 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-211ENST00000546304 SGK3Q96BR1 496 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 CMBLQ96DG6 245 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 SMIM19Q96E16 107 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 ELMOD3Q96FG2 381 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 PERPQ96FX8 193 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 LYZL4Q96KX0 146 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 SORCS2Q96PQ0 1159 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 VRK1Q99986 396 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-211ENST00000546304 SOX7Q9BT81 388 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 PAPOLGQ9BWT3 736 aaKnown RBP5.38□□□□□ -1.55
PRKDC-211ENST00000546304 COMMD4Q9H0A8 199 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 PLEKHA1Q9HB21 404 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 MSL2Q9HCI7 577 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 CYSLTR2Q9NS75 346 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 ZNF701Q9NV72 531 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-211ENST00000546304 BEX4Q9NWD9 120 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-211ENST00000546304 MRPL15Q9P015 296 aaKnown RBP5.38□□□□□ -1.55
PRKDC-211ENST00000546304 LSM2Q9Y333 95 aaKnown RBP5.38□□□□□ -1.55
PRKDC-211ENST00000546304 NOP16Q9Y3C1 178 aaKnown RBP5.38□□□□□ -1.55
PRKDC-211ENST00000546304 LRRC42Q9Y546 428 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 F8P00451 2351 aa5.38□□□□□ -1.55
PRKDC-211ENST00000546304 MTORP42345 2549 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 HIVEP1P15822 2718 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 TRBV2A0A0J9YWF9 115 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 ZNF816-ZNF321PA0A0X1KG74 233 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 A0A1B0GTI1 187 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 PNMA8CA0A1B0GUJ8 204 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 A0A1B0GWJ7 208 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 LOC390937A0A1W2PQ73 354 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 DHRS7CA6NNS2 312 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 ANKRD30BLA7E2S9 258 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 C17orf100A8MU93 164 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 H3BSH0 61 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 MLNRO43193 412 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 SYT7O43581 403 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 SPRY3O43610 288 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 MRPS14O60783 128 aaKnown RBP5.37□□□□□ -1.55
PRKDC-211ENST00000546304 MTRF1O75570 445 aaKnown RBP5.37□□□□□ -1.55
PRKDC-211ENST00000546304 ZFPL1O95159 310 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 TNFAIP8O95379 198 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 IGHV1-46P01743 117 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 IGHV4-39P01824 125 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 ISG15P05161 165 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 ADH4P08319 380 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 ATP6V1B1P15313 513 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 PAX1P15863 534 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 DDOSTP39656 456 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 MAP2K4P45985 399 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 GTF2A1P52655 376 aaPredicted RBP5.37□□□□□ -1.55
PRKDC-211ENST00000546304 CDH15P55291 814 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 ATP5J2P56134 94 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 BDH1Q02338 343 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 TNK1Q13470 666 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 SPHARQ15513 63 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 MED22Q15528 200 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 DEFB113Q30KQ7 82 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 PCGF3Q3KNV8 242 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 TMEM244Q5VVB8 128 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 RPL22L1Q6P5R6 122 aaKnown RBP5.37□□□□□ -1.55
PRKDC-211ENST00000546304 Q6ZR03 302 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 ZNF367Q7RTV3 350 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 ZCCHC24Q8N2G6 241 aaKnown RBP5.37□□□□□ -1.55
PRKDC-211ENST00000546304 NANOGP1Q8N7R0 232 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 ZFP41Q8N8Y5 198 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 CCDC54Q8NEL0 328 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 CSNK2A3Q8NEV1 391 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 SEMA6DQ8NFY4 1073 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 OR8G5Q8NG78 346 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 OR2Z1Q8NG97 314 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 OR10AC1Q8NH08 325 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 OR5AK2Q8NH90 309 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 RGP1Q92546 391 aaPredicted RBP5.37□□□□□ -1.55
PRKDC-211ENST00000546304 TRMT61AQ96FX7 289 aaKnown RBP5.37□□□□□ -1.55
PRKDC-211ENST00000546304 PGLYRP3Q96LB9 341 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 OR5M11Q96RB7 305 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 PDCD1LG2Q9BQ51 273 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 SLC30A2Q9BRI3 323 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 YTHDF1Q9BYJ9 559 aaKnown RBP5.37□□□□□ -1.55
PRKDC-211ENST00000546304 SLC22A4Q9H015 551 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 RAB1BQ9H0U4 201 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 MS4A5Q9H3V2 200 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 SAP30LQ9HAJ7 183 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 BABAM2Q9NXR7 383 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 ZDHHC8Q9ULC8 765 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms