RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 SPEM2Q0P670 501 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 ZNF239Q16600 458 aaKnown RBP7.7□□□□□ -1.18
TDP1-204ENST00000545686 C14orf28Q4W4Y0 310 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 SGPP2Q8IWX5 399 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 D2HGDHQ8N465 521 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 CCDC54Q8NEL0 328 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 OR6X1Q8NH79 312 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 TCEAL3Q969E4 200 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 MRPL38Q96DV4 380 aaKnown RBP7.7□□□□□ -1.18
TDP1-204ENST00000545686 FAM71F1Q96KD3 344 aaPredicted RBP7.7□□□□□ -1.18
TDP1-204ENST00000545686 AMDHD2Q9Y303 409 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 SLCO1B1Q9Y6L6 691 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 UNC80Q8N2C7 3258 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 IGKV1-9A0A0C4DH69 117 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 RHPN2P1A8MT19 583 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 C9JQL5 133 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 SDCBPO00560 298 aaPredicted RBP7.7□□□□□ -1.18
TDP1-204ENST00000545686 TRAF3IP2O43734 574 aaPredicted RBP7.7□□□□□ -1.18
TDP1-204ENST00000545686 S100A6P06703 90 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 OR8U9P0C7N5 309 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 NR2C1P13056 603 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 BLVRBP30043 206 aaPredicted RBP7.7□□□□□ -1.18
TDP1-204ENST00000545686 SNCAP37840 140 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 RAB5CP51148 216 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 TMEM33P57088 247 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 FBXW4P57775 412 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 SNRPEP62304 92 aaKnown RBP7.7□□□□□ -1.18
TDP1-204ENST00000545686 MYBPHQ13203 477 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 KISS1Q15726 138 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 SMAD2Q15796 467 aaKnown RBP7.7□□□□□ -1.18
TDP1-204ENST00000545686 HIST3H3Q16695 136 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 EIF2S3LQ2VIR3 472 aaKnown RBP7.7□□□□□ -1.18
TDP1-204ENST00000545686 OR2A2Q6IF42 318 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 OGFOD3Q6PK18 319 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 Q6ZSR3 168 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 SULF2Q8IWU5 870 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 OR8U1Q8NH10 309 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 RELTQ969Z4 430 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 C10orf35Q96D05 121 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 SHDQ96IW2 340 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 AKR1E2Q96JD6 320 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 CLCC1Q96S66 551 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 TMEM106CQ9BVX2 250 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 TGIF2Q9GZN2 237 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 SEBOXQ9HB31 216 aaPredicted RBP7.7□□□□□ -1.18
TDP1-204ENST00000545686 SDHAF3Q9NRP4 125 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 LHX6Q9UPM6 363 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 VDAC3Q9Y277 283 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 BORCS7-ASMTA0A0B4J1R7 106 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 A0A0U1RQV5 110 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 E5RGE8 158 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 TSPAN15O95858 294 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 GLP1RP43220 463 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 RHEBQ15382 184 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 PLPPR5Q32ZL2 321 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 LANCL3Q6ZV70 420 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 C7orf61Q8IZ16 206 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 ZNF283Q8N7M2 679 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 SNIP1Q8TAD8 396 aaKnown RBP7.69□□□□□ -1.18
TDP1-204ENST00000545686 PP6455Q8WZ26 134 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 MALSU1Q96EH3 234 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 SOX7Q9BT81 388 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 PLA2G2EQ9NZK7 142 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 CLEC1BQ9P126 229 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 LUZP4Q9P127 313 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 SEMA5BQ9P283 1151 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 ZNF319Q9P2F9 582 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 NSG2Q9Y328 171 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 STRAPQ9Y3F4 350 aaKnown RBP7.69□□□□□ -1.18
TDP1-204ENST00000545686 UNC13CQ8NB66 2214 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 LOC102725191A0A1B0GVB3 256 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 LMO7DNF2Z398 122 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 H3BML4 177 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 AGPAT2O15120 278 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 KNG1P01042 644 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 DANCRP0C864 163 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 SLC2A1P11166 492 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 ZNF44P15621 663 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 PPT1P50897 306 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 ACY1Q03154 408 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 AWAT1Q58HT5 328 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 GPR157Q5UAW9 335 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 CRIP3Q6Q6R5 217 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 FAM57BQ71RH2 274 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 PRSS58Q8IYP2 241 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 APCDD1LQ8NCL9 501 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 SEMA6DQ8NFY4 1073 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 SECTM1Q8WVN6 248 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 OXGR1Q96P68 337 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 NUDT22Q9BRQ3 303 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 GINS3Q9BRX5 216 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 RGCCQ9H4X1 137 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 RPS10P5Q9NQ39 176 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 V9GYS6 101 aa7.69□□□□□ -1.18
TDP1-204ENST00000545686 A0A1B0GW64 132 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 A0A1W2PR77 199 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 C7orf77A4D0Y5 90 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 EPOPA6NHQ4 379 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 SGCEO43556 437 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 DHRS3O75911 302 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms