RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 LOC110117498-PIK3R3F6TDL0 507 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 NDUFA2O43678 99 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 MPZL2O60487 215 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 BAG2O95816 211 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 CST4P01036 141 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 KRT8P05787 483 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 WNT2P09544 360 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 RPS2P15880 293 aaKnown RBP6.17□□□□□ -1.42
CPSF7-224ENST00000544990 PMELP40967 661 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 GNB2P62879 340 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 LCN2P80188 198 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 PRDX4Q13162 271 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 ZNF404Q494X3 552 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 DCDC5Q6ZRR9 648 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 YIPF7Q8N8F6 280 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 BOLLQ8N9W6 283 aaKnown RBP6.17□□□□□ -1.42
CPSF7-224ENST00000544990 SEMA6DQ8NFY4 1073 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 OR8B3Q8NGG8 313 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 PIGCQ92535 297 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 DVL3Q92997 716 aaPredicted RBP6.17□□□□□ -1.42
CPSF7-224ENST00000544990 NEIL1Q96FI4 390 aaPredicted RBP6.17□□□□□ -1.42
CPSF7-224ENST00000544990 RAX2Q96IS3 184 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 OR8B2Q96RD0 313 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 MYCBPQ99417 103 aaPredicted RBP6.17□□□□□ -1.42
CPSF7-224ENST00000544990 APOL4Q9BPW4 351 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 TMEM246Q9BRR3 403 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 RTL8AQ9BWD3 113 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 SSBP3Q9BWW4 388 aaPredicted RBP6.17□□□□□ -1.42
CPSF7-224ENST00000544990 TTTY10Q9BZA0 68 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 PBOV1Q9GZY1 135 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 MOB1AQ9H8S9 216 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 RNPEPL1Q9HAU8 725 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 C1orf123Q9NWV4 160 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 FAM206AQ9NX38 181 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 OR5V1Q9UGF6 321 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 NUFIP1Q9UHK0 495 aaKnown RBP6.17□□□□□ -1.42
CPSF7-224ENST00000544990 GTF2A1LQ9UNN4 478 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 RHBDD3Q9Y3P4 386 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 GMPPBQ9Y5P6 360 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 SNX5Q9Y5X3 404 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 ARHGAP32A7KAX9 2087 aa6.17□□□□□ -1.42
CPSF7-224ENST00000544990 ZNF816-ZNF321PA0A0X1KG74 233 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 A0A1W2PQL4 384 aaPredicted RBP6.16□□□□□ -1.42
CPSF7-224ENST00000544990 METTL15A6NJ78 407 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 TMEM210A6NLX4 147 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 ZNF850A8MQ14 1090 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 A8MXK9 166 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 F5H0A9 414 aaPredicted RBP6.16□□□□□ -1.42
CPSF7-224ENST00000544990 LGALS8O00214 317 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 SULT1C4O75897 302 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 DHRS3O75911 302 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 ZFP36P26651 326 aaKnown RBP6.16□□□□□ -1.42
CPSF7-224ENST00000544990 RBMXP38159 391 aaKnown RBP6.16□□□□□ -1.42
CPSF7-224ENST00000544990 MTNR1AP48039 350 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 NPY4RP50391 375 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 SNRPGP62308 76 aaKnown RBP6.16□□□□□ -1.42
CPSF7-224ENST00000544990 ACTC1P68032 377 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 ACTA1P68133 377 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 RIPPLY1Q0D2K3 151 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 HNRNPA0Q13151 305 aaKnown RBP6.16□□□□□ -1.42
CPSF7-224ENST00000544990 PDCD1Q15116 288 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 MLANAQ16655 118 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 ZSCAN26Q16670 478 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 SLC25A30Q5SVS4 291 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 FAM201AQ5SY85 155 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 BCL2L15Q5TBC7 163 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 LIPNQ5VXI9 398 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 SFRP4Q6FHJ7 346 aaPredicted RBP6.16□□□□□ -1.42
CPSF7-224ENST00000544990 BTNL3Q6UXE8 466 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 PLEKHG7Q6ZR37 379 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 KCTD8Q6ZWB6 473 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 FAM220AQ7Z4H9 259 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 ZDHHC23Q8IYP9 409 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 GALNT4Q8N4A0 578 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 RFLNBQ8N5W9 214 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 ZNF555Q8NEP9 628 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 DEFB108BQ8NET1 73 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 OR1M1Q8NGA1 313 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 OR10H4Q8NGA5 316 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 NANPQ8TBE9 248 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 OR51E1Q8TCB6 317 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 TMEM158Q8WZ71 300 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 FOXRED1Q96CU9 486 aaPredicted RBP6.16□□□□□ -1.42
CPSF7-224ENST00000544990 RNF170Q96K19 258 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 FAM71F1Q96KD3 344 aaPredicted RBP6.16□□□□□ -1.42
CPSF7-224ENST00000544990 LYZL4Q96KX0 146 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 Q96MT0 163 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 TBX5Q99593 518 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 SLC29A1Q99808 456 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 METTL17Q9H7H0 456 aaPredicted RBP6.16□□□□□ -1.42
CPSF7-224ENST00000544990 GPR84Q9NQS5 396 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 ERVK-18Q9QC07 812 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 CLN8Q9UBY8 286 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 MRM2Q9UI43 246 aaKnown RBP6.16□□□□□ -1.42
CPSF7-224ENST00000544990 OR52A1Q9UKL2 312 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 PCDHGB1Q9Y5G3 927 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 R4GMQ9 66 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 JMJD1CQ15652 2540 aa6.16□□□□□ -1.42
CPSF7-224ENST00000544990 LOC105371242A0A075B767 164 aa6.15□□□□□ -1.42
CPSF7-224ENST00000544990 LOC100130705A0A1B0GUX0 176 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms