RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 ATG4DQ86TL0 474 aaPredicted RBP11.22□□□□□ -0.61
SMG8-202ENST00000543872 SLC22A24Q8N4F4 322 aa11.22□□□□□ -0.61
SMG8-202ENST00000543872 ANKRD9Q96BM1 317 aaPredicted RBP11.22□□□□□ -0.61
SMG8-202ENST00000543872 B3GALT5Q9Y2C3 310 aa11.22□□□□□ -0.61
SMG8-202ENST00000543872 MRPS23Q9Y3D9 190 aaKnown RBP11.22□□□□□ -0.61
SMG8-202ENST00000543872 ELOA3CA0A087WX78 387 aaPredicted RBP11.22□□□□□ -0.61
SMG8-202ENST00000543872 ZNF878C9JN71 531 aa11.22□□□□□ -0.61
SMG8-202ENST00000543872 AHSA1O95433 338 aa11.22□□□□□ -0.61
SMG8-202ENST00000543872 SEC11BP0C7V7 166 aa11.22□□□□□ -0.61
SMG8-202ENST00000543872 PNMTP11086 282 aa11.22□□□□□ -0.61
SMG8-202ENST00000543872 SLC2A1P11166 492 aa11.22□□□□□ -0.61
SMG8-202ENST00000543872 ZNF823P16415 610 aa11.22□□□□□ -0.61
SMG8-202ENST00000543872 FSTP19883 344 aa11.22□□□□□ -0.61
SMG8-202ENST00000543872 BCKDHBP21953 392 aa11.22□□□□□ -0.61
SMG8-202ENST00000543872 SNU13P55769 128 aaKnown RBP11.22□□□□□ -0.61
SMG8-202ENST00000543872 MRPS11P82912 194 aaKnown RBP11.22□□□□□ -0.61
SMG8-202ENST00000543872 TMEM31Q5JXX7 168 aa11.22□□□□□ -0.61
SMG8-202ENST00000543872 BCORP1Q8N888 145 aa11.22□□□□□ -0.61
SMG8-202ENST00000543872 CPEB3Q8NE35 698 aaKnown RBP11.22□□□□□ -0.61
SMG8-202ENST00000543872 FAM210BQ96KR6 192 aa11.22□□□□□ -0.61
SMG8-202ENST00000543872 GPER1Q99527 375 aa11.22□□□□□ -0.61
SMG8-202ENST00000543872 C1orf123Q9NWV4 160 aa11.22□□□□□ -0.61
SMG8-202ENST00000543872 PILRAQ9UKJ1 303 aa11.22□□□□□ -0.61
SMG8-202ENST00000543872 R4GMQ9 66 aa11.22□□□□□ -0.61
SMG8-202ENST00000543872 A0A0A6YYD4 124 aa11.21□□□□□ -0.61
SMG8-202ENST00000543872 PRSS37A4D1T9 235 aa11.21□□□□□ -0.61
SMG8-202ENST00000543872 RBFOX3A6NFN3 312 aa11.21□□□□□ -0.61
SMG8-202ENST00000543872 ZNF724A8MTY0 619 aa11.21□□□□□ -0.61
SMG8-202ENST00000543872 SMIM10L1P0DMW3 83 aa11.21□□□□□ -0.61
SMG8-202ENST00000543872 FGF7P21781 194 aa11.21□□□□□ -0.61
SMG8-202ENST00000543872 MAS1LP35410 378 aa11.21□□□□□ -0.61
SMG8-202ENST00000543872 ZNF93P35789 620 aaPredicted RBP11.21□□□□□ -0.61
SMG8-202ENST00000543872 GABREP78334 506 aa11.21□□□□□ -0.61
SMG8-202ENST00000543872 SP3Q02447 781 aa11.21□□□□□ -0.61
SMG8-202ENST00000543872 NKAIN3Q8N8D7 197 aa11.21□□□□□ -0.61
SMG8-202ENST00000543872 OR52N5Q8NH56 324 aa11.21□□□□□ -0.61
SMG8-202ENST00000543872 NT5CQ8TCD5 201 aa11.21□□□□□ -0.61
SMG8-202ENST00000543872 PTX4Q96A99 478 aa11.21□□□□□ -0.61
SMG8-202ENST00000543872 C8orf44Q96CB5 159 aa11.21□□□□□ -0.61
SMG8-202ENST00000543872 SMIM10Q96HG1 83 aa11.21□□□□□ -0.61
SMG8-202ENST00000543872 TBC1D29Q9UFV1 150 aa11.21□□□□□ -0.61
SMG8-202ENST00000543872 TMED3Q9Y3Q3 217 aa11.21□□□□□ -0.61
SMG8-202ENST00000543872 SYT7O43581 403 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 CRTAPO75718 401 aaPredicted RBP11.21□□□□□ -0.62
SMG8-202ENST00000543872 APOBEC1P41238 236 aaKnown RBP11.21□□□□□ -0.62
SMG8-202ENST00000543872 SGPP2Q8IWX5 399 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 CYB561D1Q8N8Q1 229 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 OR5D18Q8NGL1 313 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 OR9A4Q8NGU2 314 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 M1APQ8TC57 530 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 CTHRC1Q96CG8 243 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 LRRC3BQ96PB8 259 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 OR2M4Q96R27 311 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 SLC25A31Q9H0C2 315 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 OR51B6Q9H340 312 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 ZNF701Q9NV72 531 aaPredicted RBP11.21□□□□□ -0.62
SMG8-202ENST00000543872 HSPB2A8KAH6 182 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 CEACAM5P06731 702 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 OMGP23515 440 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 MSX1P28360 303 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 BTG2P78543 158 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 HSPB2Q16082 182 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 DEFB110Q30KQ9 67 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 NKAIN1Q4KMZ8 207 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 EMC4Q5J8M3 183 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 AADACL3Q5VUY0 350 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 TANGO2Q6ICL3 276 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 LPAR5Q9H1C0 372 aa11.21□□□□□ -0.62
SMG8-202ENST00000543872 SLC31A1O15431 190 aa11.2□□□□□ -0.62
SMG8-202ENST00000543872 MMP7P09237 267 aaPredicted RBP11.2□□□□□ -0.62
SMG8-202ENST00000543872 H2BFMP0C1H6 154 aa11.2□□□□□ -0.62
SMG8-202ENST00000543872 RND3P61587 244 aa11.2□□□□□ -0.62
SMG8-202ENST00000543872 PCK2Q16822 640 aa11.2□□□□□ -0.62
SMG8-202ENST00000543872 CHRFAM7AQ494W8 412 aa11.2□□□□□ -0.62
SMG8-202ENST00000543872 TIPARPQ7Z3E1 657 aaKnown RBP11.2□□□□□ -0.62
SMG8-202ENST00000543872 RSC1A1Q92681 617 aa11.2□□□□□ -0.62
SMG8-202ENST00000543872 C9J4A7 227 aa11.2□□□□□ -0.62
SMG8-202ENST00000543872 BPNT1O95861 308 aa11.2□□□□□ -0.62
SMG8-202ENST00000543872 HIST1H1DP16402 221 aaKnown RBP11.2□□□□□ -0.62
SMG8-202ENST00000543872 TMEM50BP56557 158 aa11.2□□□□□ -0.62
SMG8-202ENST00000543872 ZNF77Q15935 545 aa11.2□□□□□ -0.62
SMG8-202ENST00000543872 OR2G3Q8NGZ4 309 aa11.2□□□□□ -0.62
SMG8-202ENST00000543872 FAM3CQ92520 227 aa11.2□□□□□ -0.62
SMG8-202ENST00000543872 VSTM2LQ96N03 204 aa11.2□□□□□ -0.62
SMG8-202ENST00000543872 NIPSNAP3BQ9BS92 247 aa11.2□□□□□ -0.62
SMG8-202ENST00000543872 LMF2Q9BU23 707 aaKnown RBP11.2□□□□□ -0.62
SMG8-202ENST00000543872 G6PC2Q9NQR9 355 aa11.2□□□□□ -0.62
SMG8-202ENST00000543872 CBLN4Q9NTU7 201 aa11.2□□□□□ -0.62
SMG8-202ENST00000543872 MRPS28Q9Y2Q9 187 aaKnown RBP11.2□□□□□ -0.62
SMG8-202ENST00000543872 SLC33A1O00400 549 aaPredicted RBP11.19□□□□□ -0.62
SMG8-202ENST00000543872 MBPP02686 304 aaPredicted RBP11.19□□□□□ -0.62
SMG8-202ENST00000543872 SLC35E2P0CK97 266 aa11.19□□□□□ -0.62
SMG8-202ENST00000543872 OR5H8P0DN80 308 aa11.19□□□□□ -0.62
SMG8-202ENST00000543872 RPS2P15880 293 aaKnown RBP11.19□□□□□ -0.62
SMG8-202ENST00000543872 RAB38P57729 211 aa11.19□□□□□ -0.62
SMG8-202ENST00000543872 ROM1Q03395 351 aa11.19□□□□□ -0.62
SMG8-202ENST00000543872 SGCGQ13326 291 aa11.19□□□□□ -0.62
SMG8-202ENST00000543872 VAX1Q5SQQ9 334 aa11.19□□□□□ -0.62
SMG8-202ENST00000543872 AGBL4Q5VU57 503 aa11.19□□□□□ -0.62
SMG8-202ENST00000543872 CLEC2AQ6UVW9 174 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms