RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 OR10G4Q8NGN3 311 aa7.9□□□□□ -1.15
VPS13D-212ENST00000543766 OR10Q1Q8NGQ4 319 aa7.9□□□□□ -1.15
VPS13D-212ENST00000543766 NUDCD2Q8WVJ2 157 aa7.9□□□□□ -1.15
VPS13D-212ENST00000543766 BAALCQ8WXS3 180 aa7.9□□□□□ -1.15
VPS13D-212ENST00000543766 DKK4Q9UBT3 224 aa7.9□□□□□ -1.15
VPS13D-212ENST00000543766 AK3Q9UIJ7 227 aa7.9□□□□□ -1.15
VPS13D-212ENST00000543766 GPR132Q9UNW8 380 aa7.9□□□□□ -1.15
VPS13D-212ENST00000543766 YIPF1Q9Y548 306 aa7.9□□□□□ -1.15
VPS13D-212ENST00000543766 PRSS21Q9Y6M0 314 aa7.9□□□□□ -1.15
VPS13D-212ENST00000543766 ZNF236Q9UL36 1845 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 GXYLT2A0PJZ3 443 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 TMEM89A2RUT3 159 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 WNT10BO00744 389 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 OR7C1O76099 320 aaPredicted RBP7.89□□□□□ -1.15
VPS13D-212ENST00000543766 WNT11O96014 354 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 AKAIN1P0CW23 69 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 MPC1LP0DKB6 136 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 CPMP14384 443 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 MDH2P40926 338 aaKnown RBP7.89□□□□□ -1.15
VPS13D-212ENST00000543766 KIAA0040Q15053 153 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 ACSM6Q6P461 480 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 CLEC20AQ6ZU45 233 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 SCCPDHQ8NBX0 429 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 OR5M3Q8NGP4 307 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 ZDHHC16Q969W1 377 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 ARHGAP9Q9BRR9 750 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 NDFIP1Q9BT67 221 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 TSSK6Q9BXA6 273 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 MYO10Q9HD67 2058 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 GAGE10A6NGK3 116 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 MCRIP1C9JLW8 97 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 EMC8O43402 210 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 CD14P08571 375 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 NMBRP28336 390 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 TAF6P49848 677 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 HBA1P69905 142 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 CDK5Q00535 292 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 CXCL9Q07325 125 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 FZD5Q13467 585 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 LY6G6FQ5SQ64 297 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 TEX26Q8N6G2 289 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 OR5AR1Q8NGP9 310 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 OR1B1Q8NGR6 318 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 LIN37Q96GY3 246 aaPredicted RBP7.89□□□□□ -1.15
VPS13D-212ENST00000543766 GBA2Q9HCG7 927 aaPredicted RBP7.89□□□□□ -1.15
VPS13D-212ENST00000543766 ING1Q9UK53 422 aaPredicted RBP7.89□□□□□ -1.15
VPS13D-212ENST00000543766 NPEPPSL1A6NEC2 478 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 SLC22A20A6NK97 555 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 G3V4G9 280 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 GPR75O95800 540 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 PRPH2P23942 346 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 PRTN3P24158 256 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 ZBTB25P24278 435 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 PBX2P40425 430 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 CX3CR1P49238 355 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 DIO3P55073 304 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 SEC61A1P61619 476 aaKnown RBP7.89□□□□□ -1.15
VPS13D-212ENST00000543766 RING1Q06587 406 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 LRRC75BQ2VPJ9 315 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 SPATA46Q5T0L3 261 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 H1FOOQ8IZA3 346 aaPredicted RBP7.89□□□□□ -1.15
VPS13D-212ENST00000543766 SNIP1Q8TAD8 396 aaKnown RBP7.89□□□□□ -1.15
VPS13D-212ENST00000543766 TWIST2Q8WVJ9 160 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 TMEM18Q96B42 140 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 KCTD15Q96SI1 283 aaPredicted RBP7.89□□□□□ -1.15
VPS13D-212ENST00000543766 LINC00470Q9BZP3 86 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 HES4Q9HCC6 221 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 GP6Q9HCN6 339 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 NTMQ9P121 344 aa7.89□□□□□ -1.15
VPS13D-212ENST00000543766 LSM2Q9Y333 95 aaKnown RBP7.89□□□□□ -1.15
VPS13D-212ENST00000543766 ATG2BQ96BY7 2078 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 MYADML2A6NDP7 307 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 M0R129 80 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 HNRNPDLO14979 420 aaKnown RBP7.88□□□□□ -1.15
VPS13D-212ENST00000543766 FGF17O60258 216 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 HIST1H2BKO60814 126 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 MMP23AO75900 390 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 IL18BPO95998 194 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 HIST1H2BJP06899 126 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 KITLGP21583 273 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 HIST1H2BOP23527 126 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 HIST1H2BBP33778 126 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 NPBWR2P48146 333 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 HIST1H2BDP58876 126 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 HIST1H2BCP62807 126 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 PITX1P78337 314 aaPredicted RBP7.88□□□□□ -1.15
VPS13D-212ENST00000543766 SRSF3P84103 164 aaKnown RBP7.88□□□□□ -1.15
VPS13D-212ENST00000543766 MGAT2Q10469 447 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 HIST2H2BEQ16778 126 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.88□□□□□ -1.15
VPS13D-212ENST00000543766 RPL22L1Q6P5R6 122 aaKnown RBP7.88□□□□□ -1.15
VPS13D-212ENST00000543766 GDPGP1Q6ZNW5 385 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 CALHM3Q86XJ0 350 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 RGP1Q92546 391 aaPredicted RBP7.88□□□□□ -1.15
VPS13D-212ENST00000543766 HIST1H2BHQ93079 126 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 IL17FQ96PD4 163 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 HIST1H2BNQ99877 126 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 HIST1H2BMQ99879 126 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 OR8D2Q9GZM6 311 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 KATNBL1Q9H079 304 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms