RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 ZNF781Q8N8C0 355 aa3.77□□□□□ -1.81
LIMS1-214ENST00000542845 ZNRF1Q8ND25 227 aa3.77□□□□□ -1.81
LIMS1-214ENST00000542845 SLC26A10Q8NG04 563 aa3.77□□□□□ -1.81
LIMS1-214ENST00000542845 OR6T1Q8NGN1 323 aa3.77□□□□□ -1.81
LIMS1-214ENST00000542845 OR2AE1Q8NHA4 323 aa3.77□□□□□ -1.81
LIMS1-214ENST00000542845 NDNFQ8TB73 568 aa3.77□□□□□ -1.81
LIMS1-214ENST00000542845 FNDC8Q8TC99 324 aa3.77□□□□□ -1.81
LIMS1-214ENST00000542845 TMEM255BQ8WV15 326 aa3.77□□□□□ -1.81
LIMS1-214ENST00000542845 MALSU1Q96EH3 234 aa3.77□□□□□ -1.81
LIMS1-214ENST00000542845 ITCHQ96J02 903 aa3.77□□□□□ -1.81
LIMS1-214ENST00000542845 NOL4LQ96MY1 436 aaPredicted RBP3.77□□□□□ -1.81
LIMS1-214ENST00000542845 GAFA1Q96PS6 74 aa3.77□□□□□ -1.81
LIMS1-214ENST00000542845 ALG12Q9BV10 488 aa3.77□□□□□ -1.81
LIMS1-214ENST00000542845 SLC22A4Q9H015 551 aa3.77□□□□□ -1.81
LIMS1-214ENST00000542845 WDR13Q9H1Z4 485 aa3.77□□□□□ -1.81
LIMS1-214ENST00000542845 C19orf12Q9NSK7 152 aa3.77□□□□□ -1.81
LIMS1-214ENST00000542845 VNN3Q9NY84 501 aa3.77□□□□□ -1.81
LIMS1-214ENST00000542845 NOP16Q9Y3C1 178 aaKnown RBP3.77□□□□□ -1.81
LIMS1-214ENST00000542845 ALMS1Q8TCU4 4167 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 A0A1B0GWJ7 208 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 hCG_1809904A0A1W2PP81 198 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 A0A1W2PPE2 198 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 A0A1W2PPH5 198 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 A0A1W2PR64 198 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 A0A1W2PRV1 198 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 A6NIZ1 184 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 FAM90A8PA6NJQ4 464 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 TRIM64CA6NLI5 447 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 VGLL3A8MV65 326 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 XKRYO14609 159 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 AKR7A2O43488 359 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 SLC16A7O60669 478 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 LYPD3O95274 346 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 IL6P05231 212 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 ZCCHC18P0CG32 403 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 PIPP12273 146 aaPredicted RBP3.76□□□□□ -1.81
LIMS1-214ENST00000542845 SPNP16150 400 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 CCL3L1P16619 93 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 PI3P19957 117 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 CASQ1P31415 396 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 RAP1BP61224 184 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 RAP1AP62834 184 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 ZNF92Q03936 586 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 SCARB2Q14108 478 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 SEC23BQ15437 767 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 DUSP7Q16829 419 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 RSPO1Q2MKA7 263 aaPredicted RBP3.76□□□□□ -1.81
LIMS1-214ENST00000542845 GCNT6Q5T4J0 391 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 STUMQ69YW2 141 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 WDR82Q6UXN9 313 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 ZNF788Q6ZQV5 615 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 LINC00346Q8IVM7 164 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 C11orf53Q8IXP5 236 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 OSR2Q8N2R0 312 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 GJC3Q8NFK1 279 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 OR4D11Q8NGI4 311 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 OR2T27Q8NH04 317 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 OR51A7Q8NH64 312 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 IL17DQ8TAD2 202 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 SLC26A7Q8TE54 656 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 LINC00476Q8WZB0 136 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 AKR1E2Q96JD6 320 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 GPHA2Q96T91 129 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 PITX2Q99697 317 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 PRSS27Q9BQR3 290 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 TM2D3Q9BRN9 247 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 SLC25A33Q9BSK2 321 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 WACQ9BTA9 647 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 NSRP1Q9H0G5 558 aaKnown RBP3.76□□□□□ -1.81
LIMS1-214ENST00000542845 SLC25A32Q9H2D1 315 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 RNPEPL1Q9HAU8 725 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 GRPEL1Q9HAV7 217 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 ZFP57Q9NU63 452 aa3.76□□□□□ -1.81
LIMS1-214ENST00000542845 TRAV27A0A087WT01 109 aa3.75□□□□□ -1.81
LIMS1-214ENST00000542845 IGLV1-36A0A0B4J1U3 117 aa3.75□□□□□ -1.81
LIMS1-214ENST00000542845 OR2AT4A6NND4 320 aa3.75□□□□□ -1.81
LIMS1-214ENST00000542845 ANKRD30BLA7E2S9 258 aa3.75□□□□□ -1.81
LIMS1-214ENST00000542845 PRSS47A8MTI9 375 aa3.75□□□□□ -1.81
LIMS1-214ENST00000542845 SERPINE3A8MV23 424 aa3.75□□□□□ -1.81
LIMS1-214ENST00000542845 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.75□□□□□ -1.81
LIMS1-214ENST00000542845 IMPA2O14732 288 aa3.75□□□□□ -1.81
LIMS1-214ENST00000542845 SIGLEC5O15389 551 aa3.75□□□□□ -1.81
LIMS1-214ENST00000542845 RRP9O43818 475 aaKnown RBP3.75□□□□□ -1.81
LIMS1-214ENST00000542845 SAP30O75446 220 aa3.75□□□□□ -1.81
LIMS1-214ENST00000542845 DEDDO75618 318 aa3.75□□□□□ -1.81
LIMS1-214ENST00000542845 PTBP3O95758 552 aaKnown RBP3.75□□□□□ -1.81
LIMS1-214ENST00000542845 SHBGP04278 402 aa3.75□□□□□ -1.81
LIMS1-214ENST00000542845 VIMP08670 466 aaKnown RBP3.75□□□□□ -1.81
LIMS1-214ENST00000542845 ABHD2P08910 425 aa3.75□□□□□ -1.81
LIMS1-214ENST00000542845 ACAA1P09110 424 aaPredicted RBP3.75□□□□□ -1.81
LIMS1-214ENST00000542845 ACSM4P0C7M7 580 aa3.75□□□□□ -1.81
LIMS1-214ENST00000542845 IFI30P13284 250 aa3.75□□□□□ -1.81
LIMS1-214ENST00000542845 OR3A4PP47883 348 aa3.75□□□□□ -1.81
LIMS1-214ENST00000542845 POU3F4P49335 361 aa3.75□□□□□ -1.81
LIMS1-214ENST00000542845 SLC25A1P53007 311 aa3.75□□□□□ -1.81
LIMS1-214ENST00000542845 TPTEP56180 551 aa3.75□□□□□ -1.81
LIMS1-214ENST00000542845 CAV3P56539 151 aa3.75□□□□□ -1.81
LIMS1-214ENST00000542845 TAS2R41P59536 307 aa3.75□□□□□ -1.81
LIMS1-214ENST00000542845 LSM6P62312 80 aaKnown RBP3.75□□□□□ -1.81
LIMS1-214ENST00000542845 RPL31P62899 125 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms