RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 CRIP3Q6Q6R5 217 aa23.84■■□□□ 1.41
CCM2-218ENST00000541586 LYSMD2Q8IV50 215 aa23.84■■□□□ 1.41
CCM2-218ENST00000541586 PIAS4Q8N2W9 510 aaPredicted RBP23.84■■□□□ 1.41
CCM2-218ENST00000541586 PIGTQ969N2 578 aa23.84■■□□□ 1.41
CCM2-218ENST00000541586 HAVCR1Q96D42 359 aa23.84■■□□□ 1.41
CCM2-218ENST00000541586 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP23.83■■□□□ 1.41
CCM2-218ENST00000541586 DPRXA6NFQ7 191 aa23.83■■□□□ 1.41
CCM2-218ENST00000541586 GGT3PA6NGU5 568 aa23.83■■□□□ 1.41
CCM2-218ENST00000541586 ZNF35P13682 527 aa23.83■■□□□ 1.41
CCM2-218ENST00000541586 BSPH1Q075Z2 132 aa23.83■■□□□ 1.41
CCM2-218ENST00000541586 SPATA46Q5T0L3 261 aa23.83■■□□□ 1.41
CCM2-218ENST00000541586 C1QTNF12Q5T7M4 302 aa23.83■■□□□ 1.41
CCM2-218ENST00000541586 TMEM108Q6UXF1 575 aa23.83■■□□□ 1.41
CCM2-218ENST00000541586 ANGPTL5Q86XS5 388 aa23.83■■□□□ 1.41
CCM2-218ENST00000541586 S100A16Q96FQ6 103 aaKnown RBP23.83■■□□□ 1.41
CCM2-218ENST00000541586 GPER1Q99527 375 aa23.83■■□□□ 1.41
CCM2-218ENST00000541586 ESRP2Q9H6T0 727 aaKnown RBP23.83■■□□□ 1.41
CCM2-218ENST00000541586 MOV10Q9HCE1 1003 aaKnown RBP23.83■■□□□ 1.41
CCM2-218ENST00000541586 KCNN3Q9UGI6 736 aa23.83■■□□□ 1.41
CCM2-218ENST00000541586 LDLRAD4O15165 306 aa23.82■■□□□ 1.4
CCM2-218ENST00000541586 SIAH2O43255 324 aa23.82■■□□□ 1.4
CCM2-218ENST00000541586 CD40P25942 277 aa23.82■■□□□ 1.4
CCM2-218ENST00000541586 OR3A4PP47883 348 aa23.82■■□□□ 1.4
CCM2-218ENST00000541586 UCP2P55851 309 aa23.82■■□□□ 1.4
CCM2-218ENST00000541586 PPP1CBP62140 327 aa23.82■■□□□ 1.4
CCM2-218ENST00000541586 CNN3Q15417 329 aaKnown RBP23.82■■□□□ 1.4
CCM2-218ENST00000541586 BEX5Q5H9J7 111 aa23.82■■□□□ 1.4
CCM2-218ENST00000541586 PIGCQ92535 297 aa23.82■■□□□ 1.4
CCM2-218ENST00000541586 ITFG2Q969R8 447 aa23.82■■□□□ 1.4
CCM2-218ENST00000541586 SPSB1Q96BD6 273 aa23.82■■□□□ 1.4
CCM2-218ENST00000541586 CAPZA1P52907 286 aa23.81■■□□□ 1.4
CCM2-218ENST00000541586 AWAT2Q6E213 333 aa23.81■■□□□ 1.4
CCM2-218ENST00000541586 IZUMO1Q8IYV9 350 aa23.81■■□□□ 1.4
CCM2-218ENST00000541586 Q8N402 240 aa23.81■■□□□ 1.4
CCM2-218ENST00000541586 RADILQ96JH8 1075 aa23.81■■□□□ 1.4
CCM2-218ENST00000541586 ABHD1Q96SE0 405 aa23.81■■□□□ 1.4
CCM2-218ENST00000541586 MYEF2Q9P2K5 600 aaKnown RBP23.81■■□□□ 1.4
CCM2-218ENST00000541586 MRPS28Q9Y2Q9 187 aaKnown RBP23.81■■□□□ 1.4
CCM2-218ENST00000541586 HEATR1Q9H583 2144 aaKnown RBP23.81■■□□□ 1.4
CCM2-218ENST00000541586 CD300LBA8K4G0 201 aa23.81■■□□□ 1.4
CCM2-218ENST00000541586 DEFB108AA8MXU0 73 aa23.81■■□□□ 1.4
CCM2-218ENST00000541586 BPNT1O95861 308 aa23.81■■□□□ 1.4
CCM2-218ENST00000541586 IL7P13232 177 aa23.81■■□□□ 1.4
CCM2-218ENST00000541586 PTAFRP25105 342 aa23.81■■□□□ 1.4
CCM2-218ENST00000541586 NR4A2P43354 598 aa23.81■■□□□ 1.4
CCM2-218ENST00000541586 PYHIN1Q6K0P9 492 aa23.81■■□□□ 1.4
CCM2-218ENST00000541586 CSNK2A3Q8NEV1 391 aa23.81■■□□□ 1.4
CCM2-218ENST00000541586 RFT1Q96AA3 541 aa23.81■■□□□ 1.4
CCM2-218ENST00000541586 MRPS7Q9Y2R9 242 aaKnown RBP23.81■■□□□ 1.4
CCM2-218ENST00000541586 ABCD4O14678 606 aa23.8■■□□□ 1.4
CCM2-218ENST00000541586 CSF3P09919 207 aa23.8■■□□□ 1.4
CCM2-218ENST00000541586 PRKACBP22694 351 aa23.8■■□□□ 1.4
CCM2-218ENST00000541586 NCMAPQ5T1S8 102 aa23.8■■□□□ 1.4
CCM2-218ENST00000541586 OR10K2Q6IF99 312 aa23.8■■□□□ 1.4
CCM2-218ENST00000541586 BAIAP2L2Q6UXY1 529 aa23.8■■□□□ 1.4
CCM2-218ENST00000541586 FBXW12Q6X9E4 464 aa23.8■■□□□ 1.4
CCM2-218ENST00000541586 MOB3CQ70IA8 216 aa23.8■■□□□ 1.4
CCM2-218ENST00000541586 KRT74Q7RTS7 529 aa23.8■■□□□ 1.4
CCM2-218ENST00000541586 BIVMQ86UB2 503 aa23.8■■□□□ 1.4
CCM2-218ENST00000541586 IGHV2OR16-5A0A0B4J2B6 119 aa23.79■■□□□ 1.4
CCM2-218ENST00000541586 ZNF850A8MQ14 1090 aa23.79■■□□□ 1.4
CCM2-218ENST00000541586 CDK2P24941 298 aa23.79■■□□□ 1.4
CCM2-218ENST00000541586 ERVS71-1P61550 626 aa23.79■■□□□ 1.4
CCM2-218ENST00000541586 QRFPP83859 136 aa23.79■■□□□ 1.4
CCM2-218ENST00000541586 PLCXD3Q63HM9 321 aa23.79■■□□□ 1.4
CCM2-218ENST00000541586 GLIPR1L1Q6UWM5 242 aa23.79■■□□□ 1.4
CCM2-218ENST00000541586 PNLDC1Q8NA58 520 aaKnown RBP23.79■■□□□ 1.4
CCM2-218ENST00000541586 OR1J1Q8NGS3 322 aa23.79■■□□□ 1.4
CCM2-218ENST00000541586 PAPOLGQ9BWT3 736 aaKnown RBP23.79■■□□□ 1.4
CCM2-218ENST00000541586 OR2J1Q9GZK6 312 aa23.79■■□□□ 1.4
CCM2-218ENST00000541586 NEK6Q9HC98 313 aa23.79■■□□□ 1.4
CCM2-218ENST00000541586 GPR160Q9UJ42 338 aa23.79■■□□□ 1.4
CCM2-218ENST00000541586 CADP27708 2225 aa23.79■■□□□ 1.4
CCM2-218ENST00000541586 FAM230AA0A1W2PPH8 454 aa23.79■■□□□ 1.4
CCM2-218ENST00000541586 A6NNC1 897 aa23.79■■□□□ 1.4
CCM2-218ENST00000541586 CTAG2O75638 210 aa23.79■■□□□ 1.4
CCM2-218ENST00000541586 CRYAAP02489 173 aa23.79■■□□□ 1.4
CCM2-218ENST00000541586 NAAAQ02083 359 aa23.79■■□□□ 1.4
CCM2-218ENST00000541586 DAZAP2Q15038 168 aaPredicted RBP23.79■■□□□ 1.4
CCM2-218ENST00000541586 SLC22A25Q6T423 547 aa23.79■■□□□ 1.4
CCM2-218ENST00000541586 OR5D18Q8NGL1 313 aa23.79■■□□□ 1.4
CCM2-218ENST00000541586 TECTBQ96PL2 329 aa23.79■■□□□ 1.4
CCM2-218ENST00000541586 HS3ST6Q96QI5 342 aa23.79■■□□□ 1.4
CCM2-218ENST00000541586 ISPDA4D126 451 aa23.78■■□□□ 1.4
CCM2-218ENST00000541586 CST4P01036 141 aa23.78■■□□□ 1.4
CCM2-218ENST00000541586 CD3EP07766 207 aa23.78■■□□□ 1.4
CCM2-218ENST00000541586 VSIG8P0DPA2 414 aa23.78■■□□□ 1.4
CCM2-218ENST00000541586 CALCRP30988 508 aa23.78■■□□□ 1.4
CCM2-218ENST00000541586 PTGFRP43088 359 aa23.78■■□□□ 1.4
CCM2-218ENST00000541586 MTCP1P56278 107 aa23.78■■□□□ 1.4
CCM2-218ENST00000541586 RGS21Q2M5E4 152 aa23.78■■□□□ 1.4
CCM2-218ENST00000541586 C3orf36Q3SXR2 165 aa23.78■■□□□ 1.4
CCM2-218ENST00000541586 ADAM5Q6NVV9 412 aa23.78■■□□□ 1.4
CCM2-218ENST00000541586 FTMTQ8N4E7 242 aa23.78■■□□□ 1.4
CCM2-218ENST00000541586 BHLHE23Q8NDY6 225 aa23.78■■□□□ 1.4
CCM2-218ENST00000541586 SLC25A40Q8TBP6 338 aa23.78■■□□□ 1.4
CCM2-218ENST00000541586 PTX4Q96A99 478 aa23.78■■□□□ 1.4
CCM2-218ENST00000541586 C1orf147Q96MC9 270 aaPredicted RBP23.78■■□□□ 1.4
CCM2-218ENST00000541586 OCEL1Q9H607 264 aa23.78■■□□□ 1.4
CCM2-218ENST00000541586 IGKV1-27A0A075B6S5 117 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms