RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 TBC1D23Q9NUY8 699 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 DPM3Q9P2X0 92 aa7.4□□□□□ -1.22
YBX3-211ENST00000541351 COA3Q9Y2R0 106 aaPredicted RBP7.4□□□□□ -1.22
YBX3-211ENST00000541351 OR6C68A6NDL8 312 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 EVPLLA8MZ36 301 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 SLC22A2O15244 555 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 HSPA12AO43301 675 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 AKR7A2O43488 359 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 LYPD3O95274 346 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 SERPINA1P01009 418 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 AMY1AP04745 511 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 AMY2AP04746 511 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 RPLP1P05386 114 aaKnown RBP7.39□□□□□ -1.23
YBX3-211ENST00000541351 OR8U9P0C7N5 309 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 IDO1P14902 403 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 ARSBP15848 533 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 IL12AP29459 219 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 AQP1P29972 269 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 SLC9A3P48764 834 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 RPL14P50914 215 aaKnown RBP7.39□□□□□ -1.23
YBX3-211ENST00000541351 ACTA2P62736 377 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 ACTG2P63267 376 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 ACTC1P68032 377 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 ACTA1P68133 377 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 ZNF616Q08AN1 781 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 GPR50Q13585 617 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 RFX4Q33E94 735 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 CCDC80Q76M96 950 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 ADCK1Q86TW2 530 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 OAFQ86UD1 273 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 DPP10Q8N608 796 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 ZNF671Q8TAW3 534 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 ZNF596Q8TC21 504 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 APOPT1Q96IL0 206 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 NOL4LQ96MY1 436 aaPredicted RBP7.39□□□□□ -1.23
YBX3-211ENST00000541351 OR4C12Q96R67 309 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 CLEC7AQ9BXN2 247 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 PCDHB16Q9NRJ7 776 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 DNAJB9Q9UBS3 223 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.39□□□□□ -1.23
YBX3-211ENST00000541351 LHFPL6Q9Y693 200 aa7.39□□□□□ -1.23
YBX3-211ENST00000541351 LEUTXA8MZ59 168 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 FGF16O43320 207 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 OR5F1O95221 314 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 CD14P08571 375 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 PSG2P11465 335 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 FSTP19883 344 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 ISL1P61371 349 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 CKAP4Q07065 602 aaKnown RBP7.38□□□□□ -1.23
YBX3-211ENST00000541351 WHAMMP3Q1A5X7 153 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 SMIM21Q3B7S5 101 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 GTDC1Q4AE62 458 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 GPR139Q6DWJ6 353 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 KCTD8Q6ZWB6 473 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 OR6V1Q8N148 313 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 C4orf33Q8N1A6 199 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 RNF152Q8N8N0 203 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 FAM156AQ8NDB6 213 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 OR4M1Q8NGD0 313 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 OR2AE1Q8NHA4 323 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 TMEM255BQ8WV15 326 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 LZICQ8WZA0 190 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 KCTD12Q96CX2 325 aaKnown RBP7.38□□□□□ -1.23
YBX3-211ENST00000541351 BPIFA2Q96DR5 249 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 ZNF714Q96N38 554 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 HIST1H2AAQ96QV6 131 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 PRSS27Q9BQR3 290 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 WFDC6Q9BQY6 131 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 PAPOLGQ9BWT3 736 aaKnown RBP7.38□□□□□ -1.23
YBX3-211ENST00000541351 SYT4Q9H2B2 425 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 NMNAT1Q9HAN9 279 aaPredicted RBP7.38□□□□□ -1.23
YBX3-211ENST00000541351 RASL12Q9NYN1 266 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 ADA2Q9NZK5 511 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 RAP2CQ9Y3L5 183 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 MPC1Q9Y5U8 109 aa7.38□□□□□ -1.23
YBX3-211ENST00000541351 PLECQ15149 4684 aaKnown RBP7.37□□□□□ -1.23
YBX3-211ENST00000541351 IGKV1D-17A0A075B6S4 117 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 IGHV2-26A0A0B4J1V2 119 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 SH2D7A6NKC9 451 aaPredicted RBP7.37□□□□□ -1.23
YBX3-211ENST00000541351 OOSP1A8MZH6 123 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 DEDDO75618 318 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 IGHG2P01859 326 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 IFI30P13284 250 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 RHCEP18577 417 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 CD24P25063 80 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 KRR1Q13601 381 aaKnown RBP7.37□□□□□ -1.23
YBX3-211ENST00000541351 NFYCQ13952 458 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 ZNF273Q14593 569 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 DUSP7Q16829 419 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 RSPO1Q2MKA7 263 aaPredicted RBP7.37□□□□□ -1.23
YBX3-211ENST00000541351 SNAI3Q3KNW1 292 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 GLYATL3Q5SZD4 288 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 LDLRAD2Q5SZI1 272 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 OR52W1Q6IF63 320 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 WDR93Q6P2C0 686 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 TMEM65Q6PI78 240 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 CORO6Q6QEF8 472 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 PATL1Q86TB9 770 aaKnown RBP7.37□□□□□ -1.23
YBX3-211ENST00000541351 WDR86Q86TI4 376 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 RTN4RL2Q86UN3 420 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms