RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 ZNF629Q9UEG4 869 aaPredicted RBP8.35□□□□□ -1.07
CNOT4-212ENST00000541284 ASPMQ8IZT6 3477 aa8.35□□□□□ -1.07
CNOT4-212ENST00000541284 CACNA1EQ15878 2313 aa8.35□□□□□ -1.07
CNOT4-212ENST00000541284 DHRS7CA6NNS2 312 aa8.35□□□□□ -1.07
CNOT4-212ENST00000541284 TOX3O15405 576 aaPredicted RBP8.35□□□□□ -1.07
CNOT4-212ENST00000541284 HKR1P10072 659 aa8.35□□□□□ -1.07
CNOT4-212ENST00000541284 MUC1P15941 1255 aaPredicted RBP8.35□□□□□ -1.07
CNOT4-212ENST00000541284 RCC1P18754 421 aaPredicted RBP8.35□□□□□ -1.07
CNOT4-212ENST00000541284 C10orf128Q5T292 105 aa8.35□□□□□ -1.07
CNOT4-212ENST00000541284 CPEB2Q7Z5Q1 589 aaKnown RBP8.35□□□□□ -1.07
CNOT4-212ENST00000541284 TMEM123Q8N131 208 aa8.35□□□□□ -1.07
CNOT4-212ENST00000541284 OR5D18Q8NGL1 313 aa8.35□□□□□ -1.07
CNOT4-212ENST00000541284 RNF141Q8WVD5 230 aa8.35□□□□□ -1.07
CNOT4-212ENST00000541284 C2orf50Q96LR7 162 aa8.35□□□□□ -1.07
CNOT4-212ENST00000541284 CDC6Q99741 560 aa8.35□□□□□ -1.07
CNOT4-212ENST00000541284 SCRT1Q9BWW7 348 aa8.35□□□□□ -1.07
CNOT4-212ENST00000541284 TMEM231Q9H6L2 316 aa8.35□□□□□ -1.07
CNOT4-212ENST00000541284 HPF1Q9NWY4 346 aa8.35□□□□□ -1.07
CNOT4-212ENST00000541284 SLC39A1Q9NY26 324 aa8.35□□□□□ -1.07
CNOT4-212ENST00000541284 NDRG3Q9UGV2 375 aa8.35□□□□□ -1.07
CNOT4-212ENST00000541284 PCDHGA1Q9Y5H4 931 aa8.35□□□□□ -1.07
CNOT4-212ENST00000541284 OR5H15A6NDH6 313 aa8.35□□□□□ -1.07
CNOT4-212ENST00000541284 SNU13P55769 128 aaKnown RBP8.35□□□□□ -1.07
CNOT4-212ENST00000541284 CYCSP99999 105 aaKnown RBP8.35□□□□□ -1.07
CNOT4-212ENST00000541284 RBM39Q14498 530 aaKnown RBP8.35□□□□□ -1.07
CNOT4-212ENST00000541284 BTNL8Q6UX41 500 aa8.35□□□□□ -1.07
CNOT4-212ENST00000541284 OR2AJ1Q8NGZ0 328 aa8.35□□□□□ -1.07
CNOT4-212ENST00000541284 LYPD6BQ8NI32 183 aa8.35□□□□□ -1.07
CNOT4-212ENST00000541284 UQCC1Q9NVA1 299 aa8.35□□□□□ -1.07
CNOT4-212ENST00000541284 ASCC3Q8N3C0 2202 aaKnown RBP8.34□□□□□ -1.07
CNOT4-212ENST00000541284 A0A0U1RQV5 110 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 CA11O75493 328 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 HTR3BO95264 441 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 CELA2AP08217 269 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 HCKP08631 526 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 FCGR3AP08637 254 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 THBS4P35443 961 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 HGFACQ04756 655 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 PJVKQ0ZLH3 352 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 ECH1Q13011 328 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 DAZAP2Q15038 168 aaPredicted RBP8.34□□□□□ -1.07
CNOT4-212ENST00000541284 OR2A2Q6IF42 318 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 Q6ZPA2 131 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 OR5H2Q8NGV7 314 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 OR6C1Q96RD1 312 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 TSNAXQ99598 290 aaKnown RBP8.34□□□□□ -1.07
CNOT4-212ENST00000541284 NRIP2Q9BQI9 281 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 HDHD3Q9BSH5 251 aaPredicted RBP8.34□□□□□ -1.07
CNOT4-212ENST00000541284 ESRP2Q9H6T0 727 aaKnown RBP8.34□□□□□ -1.07
CNOT4-212ENST00000541284 RCC2Q9P258 522 aaKnown RBP8.34□□□□□ -1.07
CNOT4-212ENST00000541284 DNAJB11Q9UBS4 358 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 FAM96BQ9Y3D0 163 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 RRP8O43159 456 aaKnown RBP8.34□□□□□ -1.07
CNOT4-212ENST00000541284 ZNF43P17038 809 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 CBX5P45973 191 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 LSM6P62312 80 aaKnown RBP8.34□□□□□ -1.07
CNOT4-212ENST00000541284 GRB2P62993 217 aaKnown RBP8.34□□□□□ -1.07
CNOT4-212ENST00000541284 RPL7L1Q6DKI1 246 aaKnown RBP8.34□□□□□ -1.07
CNOT4-212ENST00000541284 MRPL14Q6P1L8 145 aaKnown RBP8.34□□□□□ -1.07
CNOT4-212ENST00000541284 IL34Q6ZMJ4 242 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 DBX2Q6ZNG2 339 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 CCDC36Q8IYA8 594 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 SVBPQ8N300 66 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 SPACA9Q96E40 222 aaPredicted RBP8.34□□□□□ -1.07
CNOT4-212ENST00000541284 NARS2Q96I59 477 aaKnown RBP8.34□□□□□ -1.07
CNOT4-212ENST00000541284 CHST5Q9GZS9 411 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 FOXD3Q9UJU5 478 aaPredicted RBP8.34□□□□□ -1.07
CNOT4-212ENST00000541284 AMDHD2Q9Y303 409 aa8.34□□□□□ -1.07
CNOT4-212ENST00000541284 MEX3AA1L020 520 aaKnown RBP8.33□□□□□ -1.08
CNOT4-212ENST00000541284 TERTO14746 1132 aaKnown RBP8.33□□□□□ -1.08
CNOT4-212ENST00000541284 CD5P06127 495 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 FAHP16930 419 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 AMY2BP19961 511 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 LMO1P25800 156 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 SFTPDP35247 375 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 SHEQ5VZ18 495 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 ZIC4Q8N9L1 334 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 ARL11Q969Q4 196 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 ZNF837Q96EG3 531 aaPredicted RBP8.33□□□□□ -1.08
CNOT4-212ENST00000541284 ZNF385AQ96PM9 386 aaKnown RBP8.33□□□□□ -1.08
CNOT4-212ENST00000541284 ST6GALNAC5Q9BVH7 336 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 SEC11CQ9BY50 192 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 SDHAF3Q9NRP4 125 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 TUBD1Q9UJT1 453 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 HDGFL3Q9Y3E1 203 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 IGKV1-27A0A075B6S5 117 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 NUDT19A8MXV4 375 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 STMND1H3BQB6 276 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 GDF9O60383 454 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 DBHP09172 617 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 PCOLCEQ15113 449 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 SURF2Q15527 256 aaPredicted RBP8.33□□□□□ -1.08
CNOT4-212ENST00000541284 GFOD2Q3B7J2 385 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 SNAI3Q3KNW1 292 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 TMEM176BQ3YBM2 270 aaPredicted RBP8.33□□□□□ -1.08
CNOT4-212ENST00000541284 GUSBP11Q6P575 273 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 ZNF283Q8N7M2 679 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 NPRL2Q8WTW4 380 aa8.33□□□□□ -1.08
CNOT4-212ENST00000541284 BSCL2Q96G97 398 aaPredicted RBP8.33□□□□□ -1.08
CNOT4-212ENST00000541284 Q96M66 194 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms