RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 RAB40BQ12829 278 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 TP53I3Q53FA7 332 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 WDR38Q5JTN6 314 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 OGFRL1Q5TC84 451 aaPredicted RBP10.93□□□□□ -0.66
LTBR-208ENST00000541005 ZNF691Q5VV52 312 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 LPCAT4Q643R3 524 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 ZNF841Q6ZN19 808 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 THAP5Q7Z6K1 395 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 PRSS35Q8N3Z0 413 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 C19orf18Q8NEA5 215 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 OR5A2Q8NGI9 324 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 C12orf43Q96C57 262 aaKnown RBP10.93□□□□□ -0.66
LTBR-208ENST00000541005 RNF170Q96K19 258 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 MYCBPQ99417 103 aaPredicted RBP10.93□□□□□ -0.66
LTBR-208ENST00000541005 METTL17Q9H7H0 456 aaPredicted RBP10.93□□□□□ -0.66
LTBR-208ENST00000541005 MMP26Q9NRE1 261 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 INPP5EQ9NRR6 644 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 KAAG1Q9UBP8 84 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 CTSZQ9UBR2 303 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 OPN4Q9UHM6 478 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 GNG8Q9UK08 70 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 DAPL1A0PJW8 107 aa10.92□□□□□ -0.66
LTBR-208ENST00000541005 C3orf80F5H4A9 247 aa10.92□□□□□ -0.66
LTBR-208ENST00000541005 P2RY10O00398 339 aa10.92□□□□□ -0.66
LTBR-208ENST00000541005 CDIPTO14735 213 aa10.92□□□□□ -0.66
LTBR-208ENST00000541005 FADS2O95864 444 aaKnown RBP10.92□□□□□ -0.66
LTBR-208ENST00000541005 UBCP0CG48 685 aaKnown RBP10.92□□□□□ -0.66
LTBR-208ENST00000541005 KIR3DL2P43630 455 aa10.92□□□□□ -0.66
LTBR-208ENST00000541005 GPM6AP51674 278 aa10.92□□□□□ -0.66
LTBR-208ENST00000541005 GNB2P62879 340 aa10.92□□□□□ -0.66
LTBR-208ENST00000541005 SCGB2A2Q13296 93 aa10.92□□□□□ -0.66
LTBR-208ENST00000541005 LRRC36Q1X8D7 754 aa10.92□□□□□ -0.66
LTBR-208ENST00000541005 C11orf91Q3C1V1 193 aa10.92□□□□□ -0.66
LTBR-208ENST00000541005 CEP78Q5JTW2 689 aa10.92□□□□□ -0.66
LTBR-208ENST00000541005 CLVS2Q5SYC1 327 aa10.92□□□□□ -0.66
LTBR-208ENST00000541005 WDR25Q64LD2 544 aaPredicted RBP10.92□□□□□ -0.66
LTBR-208ENST00000541005 SFRP4Q6FHJ7 346 aaPredicted RBP10.92□□□□□ -0.66
LTBR-208ENST00000541005 LYPD2Q6UXB3 125 aa10.92□□□□□ -0.66
LTBR-208ENST00000541005 BOLLQ8N9W6 283 aaKnown RBP10.92□□□□□ -0.66
LTBR-208ENST00000541005 SCCPDHQ8NBX0 429 aa10.92□□□□□ -0.66
LTBR-208ENST00000541005 OR2G2Q8NGZ5 317 aa10.92□□□□□ -0.66
LTBR-208ENST00000541005 RPL3LQ92901 407 aaKnown RBP10.92□□□□□ -0.66
LTBR-208ENST00000541005 MRPL48Q96GC5 212 aaKnown RBP10.92□□□□□ -0.66
LTBR-208ENST00000541005 HIST1H2AAQ96QV6 131 aa10.92□□□□□ -0.66
LTBR-208ENST00000541005 ZNF649Q9BS31 505 aa10.92□□□□□ -0.66
LTBR-208ENST00000541005 JAM3Q9BX67 310 aa10.92□□□□□ -0.66
LTBR-208ENST00000541005 OR51I2Q9H344 312 aa10.92□□□□□ -0.66
LTBR-208ENST00000541005 C7orf69Q9H7B7 122 aa10.92□□□□□ -0.66
LTBR-208ENST00000541005 CLN8Q9UBY8 286 aa10.92□□□□□ -0.66
LTBR-208ENST00000541005 RPL36Q9Y3U8 105 aaKnown RBP10.92□□□□□ -0.66
LTBR-208ENST00000541005 LOC105371242A0A075B767 164 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 IGHV2-70DA0A0C4DH43 119 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 A0A1B0GVI7 797 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 ZNF732B4DXR9 585 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 ANKRD65E5RJM6 399 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 SYT7O43581 403 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 NRASP01111 189 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 ISG15P05161 165 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 PPIAL4GP0DN37 164 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 CCR9P51686 369 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 OR12D2P58182 307 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 ADARB1P78563 741 aaKnown RBP10.91□□□□□ -0.66
LTBR-208ENST00000541005 PAX8Q06710 450 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 IL18R1Q13478 541 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 GALEQ14376 348 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 MICBQ29980 383 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 TTC23Q5W5X9 447 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 PLCXD3Q63HM9 321 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 SYS1Q8N2H4 156 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 C10orf35Q96D05 121 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 PELI1Q96FA3 418 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 ALG8Q9BVK2 526 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 DNTTIP1Q9H147 329 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 DCLRE1BQ9H816 532 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 METRNQ9UJH8 293 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 MYRFQ9Y2G1 1151 aa10.91□□□□□ -0.66
LTBR-208ENST00000541005 LOC107986453A0A1B0GWG9 222 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 PQLC2LA1A4F0 135 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 ANKRD61A6NGH8 418 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 ADAM20O43506 726 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 GYPAP02724 150 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 NANOS3P60323 173 aaKnown RBP10.9□□□□□ -0.66
LTBR-208ENST00000541005 TUSC1Q2TAM9 212 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 KLHL22Q53GT1 634 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 ATPAF1Q5TC12 328 aaPredicted RBP10.9□□□□□ -0.66
LTBR-208ENST00000541005 STUMQ69YW2 141 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 BTNL3Q6UXE8 466 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 KCTD8Q6ZWB6 473 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 MOB3CQ70IA8 216 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 SETD9Q8NE22 299 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 OR52I1Q8NGK6 324 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 NANPQ8TBE9 248 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 HAVCR2Q8TDQ0 301 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 RAB40AQ8WXH6 277 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 AQP3Q92482 292 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 C4orf36Q96KX1 117 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 TECTBQ96PL2 329 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 CHST5Q9GZS9 411 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 AMBNQ9NP70 447 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 FGF20Q9NP95 211 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms