RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 PSMB5P28074 263 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 OTX1P32242 354 aaPredicted RBP3.45□□□□□ -1.86
YBX3-210ENST00000540975 CCR7P32248 378 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 CHI3L1P36222 383 aaPredicted RBP3.45□□□□□ -1.86
YBX3-210ENST00000540975 RPL5P46777 297 aaKnown RBP3.45□□□□□ -1.86
YBX3-210ENST00000540975 MRPL19P49406 292 aaKnown RBP3.45□□□□□ -1.86
YBX3-210ENST00000540975 SRP9P49458 86 aaKnown RBP3.45□□□□□ -1.86
YBX3-210ENST00000540975 KLK7P49862 253 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 TPMTP51580 245 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 HSPA2P54652 639 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 FGF8P55075 233 aaPredicted RBP3.45□□□□□ -1.86
YBX3-210ENST00000540975 TAS2R19P59542 299 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 SELENOTP62341 195 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 PITPNAQ00169 270 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 ZNF763Q0D2J5 394 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 TAF1AQ15573 450 aaPredicted RBP3.45□□□□□ -1.86
YBX3-210ENST00000540975 ZBTB6Q15916 424 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 BSXQ3C1V8 233 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 NSUN5P1Q3KNT7 163 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 ACSBG2Q5FVE4 666 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 APOBEC3HQ6NTF7 200 aaKnown RBP3.45□□□□□ -1.86
YBX3-210ENST00000540975 ASCL4Q6XD76 172 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 HSDL2Q6YN16 418 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 MRPL21Q7Z2W9 205 aaKnown RBP3.45□□□□□ -1.86
YBX3-210ENST00000540975 MFSD6LQ8IWD5 586 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 HS3ST5Q8IZT8 346 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 PROKR2Q8NFJ6 384 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 OR51S1Q8NGJ8 323 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 OR9A2Q8NGT5 310 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 MAGEE2Q8TD90 523 aaPredicted RBP3.45□□□□□ -1.86
YBX3-210ENST00000540975 TMEM158Q8WZ71 300 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 ST8SIA1Q92185 356 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 OSTF1Q92882 214 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 UFD1Q92890 307 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 SLC38A4Q969I6 547 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 TMBIM1Q969X1 311 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 GLT1D1Q96MS3 346 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 FOPNLQ96NB1 174 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 WFIKKN1Q96NZ8 548 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 PFDN5Q99471 154 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 NIPSNAP1Q9BPW8 284 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 HOPXQ9BPY8 73 aaPredicted RBP3.45□□□□□ -1.86
YBX3-210ENST00000540975 TMEM109Q9BVC6 243 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 OR11A1Q9GZK7 315 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 SRRQ9GZT4 340 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 OR2S2Q9NQN1 319 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 CCDC59Q9P031 241 aaKnown RBP3.45□□□□□ -1.86
YBX3-210ENST00000540975 SMPXQ9UHP9 88 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 RWDD2AQ9UIY3 292 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 GNPTGQ9UJJ9 305 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 DNAJC12Q9UKB3 198 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 GOLT1BQ9Y3E0 138 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 V9GY05 133 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 TMEM2Q9UHN6 1383 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 SLIT3O75094 1523 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 C4AP0C0L4 1744 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 C4BP0C0L5 1744 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 MRC1P22897 1456 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 C1orf167Q5SNV9 1468 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 C9orf170A2RU37 121 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 MBLAC1A4D2B0 266 aaPredicted RBP3.44□□□□□ -1.86
YBX3-210ENST00000540975 METTL21EPA6NDL7 271 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 H3BN98 237 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 KPNA3O00505 521 aaPredicted RBP3.44□□□□□ -1.86
YBX3-210ENST00000540975 B4GALT5O43286 388 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 POP7O75817 140 aaKnown RBP3.44□□□□□ -1.86
YBX3-210ENST00000540975 ZMPSTE24O75844 475 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 SRP72O76094 671 aaKnown RBP3.44□□□□□ -1.86
YBX3-210ENST00000540975 CTDNEP1O95476 244 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 IFNA10P01566 189 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 IFNGP01579 166 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 S100A8P05109 93 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 GIPP09681 153 aaPredicted RBP3.44□□□□□ -1.86
YBX3-210ENST00000540975 OCM2P0CE71 109 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 RBMY1CP0DJD4 496 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 OGNP20774 298 aaKnown RBP3.44□□□□□ -1.86
YBX3-210ENST00000540975 HNRNPH3P31942 346 aaKnown RBP3.44□□□□□ -1.86
YBX3-210ENST00000540975 PMELP40967 661 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 RPL35P42766 123 aaKnown RBP3.44□□□□□ -1.86
YBX3-210ENST00000540975 KPNA2P52292 529 aaKnown RBP3.44□□□□□ -1.86
YBX3-210ENST00000540975 PLA2G16P53816 162 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 SEC61GP60059 68 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 NUTF2P61970 127 aaKnown RBP3.44□□□□□ -1.86
YBX3-210ENST00000540975 ERVK-25P63136 954 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 MRPS22P82650 360 aaKnown RBP3.44□□□□□ -1.86
YBX3-210ENST00000540975 SEMG2Q02383 582 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 SELENBP1Q13228 472 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 GRB7Q14451 532 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 EXOC3L2Q2M3D2 409 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 DEFB115Q30KQ5 88 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 COX19Q49B96 90 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 C1orf100Q5SVJ3 147 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 WDR59Q6PJI9 974 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 IZUMO2Q6UXV1 221 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 ARPINQ7Z6K5 226 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 ZNF546Q86UE3 836 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 NT5DC3Q86UY8 548 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 FUNDC1Q8IVP5 155 aa3.44□□□□□ -1.86
YBX3-210ENST00000540975 PUSL1Q8N0Z8 303 aaKnown RBP3.44□□□□□ -1.86
YBX3-210ENST00000540975 TMEM156Q8N614 296 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms