RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 SEMA6DQ8NFY4 1073 aa12.01□□□□□ -0.49
RTN3-210ENST00000540798 RNF122Q9H9V4 155 aa12.01□□□□□ -0.49
RTN3-210ENST00000540798 PLEKHA6Q9Y2H5 1048 aa12.01□□□□□ -0.49
RTN3-210ENST00000540798 GALR2O43603 387 aaPredicted RBP12.01□□□□□ -0.49
RTN3-210ENST00000540798 CRTAPO75718 401 aaPredicted RBP12.01□□□□□ -0.49
RTN3-210ENST00000540798 TOXO94900 526 aa12.01□□□□□ -0.49
RTN3-210ENST00000540798 HRH1P35367 487 aa12.01□□□□□ -0.49
RTN3-210ENST00000540798 TSPAN5P62079 268 aa12.01□□□□□ -0.49
RTN3-210ENST00000540798 SRSF4Q08170 494 aaKnown RBP12.01□□□□□ -0.49
RTN3-210ENST00000540798 C4orf46Q504U0 113 aa12.01□□□□□ -0.49
RTN3-210ENST00000540798 TMEM42Q69YG0 159 aa12.01□□□□□ -0.49
RTN3-210ENST00000540798 ZNF100Q8IYN0 542 aa12.01□□□□□ -0.49
RTN3-210ENST00000540798 TMEM251Q8N6I4 163 aa12.01□□□□□ -0.49
RTN3-210ENST00000540798 ZNF680Q8NEM1 530 aa12.01□□□□□ -0.49
RTN3-210ENST00000540798 REEP6Q96HR9 211 aa12.01□□□□□ -0.49
RTN3-210ENST00000540798 IFT46Q9NQC8 304 aa12.01□□□□□ -0.49
RTN3-210ENST00000540798 OR6C65A6NJZ3 312 aa12□□□□□ -0.49
RTN3-210ENST00000540798 IL2RAP01589 272 aa12□□□□□ -0.49
RTN3-210ENST00000540798 MAGEA5P43359 124 aa12□□□□□ -0.49
RTN3-210ENST00000540798 ZNF81P51508 661 aa12□□□□□ -0.49
RTN3-210ENST00000540798 RSPO4Q2I0M5 234 aaPredicted RBP12□□□□□ -0.49
RTN3-210ENST00000540798 DCAF12L2Q5VW00 463 aa12□□□□□ -0.49
RTN3-210ENST00000540798 SPSB1Q96BD6 273 aa12□□□□□ -0.49
RTN3-210ENST00000540798 FER1L6-AS2Q96M78 137 aa12□□□□□ -0.49
RTN3-210ENST00000540798 IFT22Q9H7X7 185 aa12□□□□□ -0.49
RTN3-210ENST00000540798 PLA2G3Q9NZ20 509 aa12□□□□□ -0.49
RTN3-210ENST00000540798 HMSDA8MTL9 139 aa12□□□□□ -0.49
RTN3-210ENST00000540798 F5H5P2 479 aa12□□□□□ -0.49
RTN3-210ENST00000540798 GOSR2O14653 212 aa12□□□□□ -0.49
RTN3-210ENST00000540798 NDUFS6O75380 124 aaKnown RBP12□□□□□ -0.49
RTN3-210ENST00000540798 CA11O75493 328 aa12□□□□□ -0.49
RTN3-210ENST00000540798 CXCL2P19875 107 aa12□□□□□ -0.49
RTN3-210ENST00000540798 RFC3P40938 356 aa12□□□□□ -0.49
RTN3-210ENST00000540798 UBE2MP61081 183 aaKnown RBP12□□□□□ -0.49
RTN3-210ENST00000540798 CXADRP78310 365 aa12□□□□□ -0.49
RTN3-210ENST00000540798 BTN1A1Q13410 526 aa12□□□□□ -0.49
RTN3-210ENST00000540798 GK2Q14410 553 aaPredicted RBP12□□□□□ -0.49
RTN3-210ENST00000540798 LY6G6FQ5SQ64 297 aa12□□□□□ -0.49
RTN3-210ENST00000540798 VAX1Q5SQQ9 334 aa12□□□□□ -0.49
RTN3-210ENST00000540798 TSPO2Q5TGU0 170 aa12□□□□□ -0.49
RTN3-210ENST00000540798 CD163Q86VB7 1156 aa12□□□□□ -0.49
RTN3-210ENST00000540798 OR8H1Q8NGG4 311 aa12□□□□□ -0.49
RTN3-210ENST00000540798 AKR7LQ8NHP1 331 aa12□□□□□ -0.49
RTN3-210ENST00000540798 ST8SIA4Q92187 359 aa12□□□□□ -0.49
RTN3-210ENST00000540798 ARHGAP5-AS1Q96IT6 56 aa12□□□□□ -0.49
RTN3-210ENST00000540798 RGCCQ9H4X1 137 aa12□□□□□ -0.49
RTN3-210ENST00000540798 B3GNT2Q9NY97 397 aa12□□□□□ -0.49
RTN3-210ENST00000540798 CEACAM18A8MTB9 384 aa12□□□□□ -0.49
RTN3-210ENST00000540798 SP1P08047 785 aa12□□□□□ -0.49
RTN3-210ENST00000540798 FCGR2AP12318 317 aa12□□□□□ -0.49
RTN3-210ENST00000540798 ZNF35P13682 527 aa12□□□□□ -0.49
RTN3-210ENST00000540798 ZBTB25P24278 435 aa12□□□□□ -0.49
RTN3-210ENST00000540798 NKPD1Q17RQ9 610 aa12□□□□□ -0.49
RTN3-210ENST00000540798 SCGB2B2Q4G0G5 96 aa12□□□□□ -0.49
RTN3-210ENST00000540798 FAHD2BQ6P2I3 314 aaPredicted RBP12□□□□□ -0.49
RTN3-210ENST00000540798 C12orf45Q8N5I9 185 aaPredicted RBP12□□□□□ -0.49
RTN3-210ENST00000540798 STEAP2Q8NFT2 490 aa12□□□□□ -0.49
RTN3-210ENST00000540798 FAHD2AQ96GK7 314 aa12□□□□□ -0.49
RTN3-210ENST00000540798 FN3KRPQ9HA64 309 aa12□□□□□ -0.49
RTN3-210ENST00000540798 BCO1Q9HAY6 547 aa12□□□□□ -0.49
RTN3-210ENST00000540798 NOSIPQ9Y314 301 aaKnown RBP12□□□□□ -0.49
RTN3-210ENST00000540798 SIX6O95475 246 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 PATE4P0C8F1 98 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 MGMTP16455 207 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 SSTR2P30874 369 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 HTR5AP47898 357 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 RIPPLY1Q0D2K3 151 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 DHRS2Q13268 280 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 TRIP6Q15654 476 aaKnown RBP11.99□□□□□ -0.49
RTN3-210ENST00000540798 ACTBL2Q562R1 376 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 ASCL4Q6XD76 172 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 LINC00696Q6ZRV3 163 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 HOGA1Q86XE5 327 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 OR2AE1Q8NHA4 323 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 TNFAIP8L1Q8WVP5 186 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 CYYR1Q96J86 154 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 SLC6A15Q9H2J7 730 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 hCG_38984A0A1B0GV85 526 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 OR2AT4A6NND4 320 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 ZNF724A8MTY0 619 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 SPEM2Q0P670 501 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 NPRL2Q8WTW4 380 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 SPSB4Q96A44 273 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 KLF13Q9Y2Y9 288 aaPredicted RBP11.99□□□□□ -0.49
RTN3-210ENST00000540798 MYO7BQ6PIF6 2116 aa11.99□□□□□ -0.49
RTN3-210ENST00000540798 FAM166BA8MTA8 275 aa11.98□□□□□ -0.49
RTN3-210ENST00000540798 MCRIP1C9JLW8 97 aa11.98□□□□□ -0.49
RTN3-210ENST00000540798 NDUFA2O43678 99 aa11.98□□□□□ -0.49
RTN3-210ENST00000540798 MRPL33O75394 65 aaKnown RBP11.98□□□□□ -0.49
RTN3-210ENST00000540798 SLC22A5O76082 557 aa11.98□□□□□ -0.49
RTN3-210ENST00000540798 HLA-GP17693 338 aa11.98□□□□□ -0.49
RTN3-210ENST00000540798 SOX8P57073 446 aa11.98□□□□□ -0.49
RTN3-210ENST00000540798 GRK1Q15835 563 aa11.98□□□□□ -0.49
RTN3-210ENST00000540798 MICBQ29980 383 aa11.98□□□□□ -0.49
RTN3-210ENST00000540798 DMRTC1Q5HYR2 192 aa11.98□□□□□ -0.49
RTN3-210ENST00000540798 COLCA1Q6ZS62 124 aa11.98□□□□□ -0.49
RTN3-210ENST00000540798 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.98□□□□□ -0.49
RTN3-210ENST00000540798 TMED4Q7Z7H5 227 aa11.98□□□□□ -0.49
RTN3-210ENST00000540798 OR51T1Q8NGJ9 327 aa11.98□□□□□ -0.49
RTN3-210ENST00000540798 OR5D18Q8NGL1 313 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms