RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	MAP2K3	P46734	347 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	BNIP1	Q12981	228 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	OCLN	Q16625	522 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	GFOD2	Q3B7J2	385 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	CEACAM21	Q3KPI0	293 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	KRT77	Q7Z794	578 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	ZDHHC23	Q8IYP9	409 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	PIP4P2	Q8N4L2	257 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	FAM216B	Q8N7L0	139 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475		Q8N7P7	452 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	OR5A2	Q8NGI9	324 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	OR5K1	Q8NHB7	308 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	ASB17	Q8WXJ9	295 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	ST8SIA4	Q92187	359 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	PIGC	Q92535	297 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	RPL3L	Q92901	407 aa	Known RBP	10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	LHX4	Q969G2	390 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	DUS3L	Q96G46	650 aa	Known RBP	10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	RNF170	Q96K19	258 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	OR8B4	Q96RC9	309 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	MRO	Q9BYG7	248 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	CHIA	Q9BZP6	476 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	WDR13	Q9H1Z4	485 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	TVP23B	Q9NYZ1	205 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	TMEM14A	Q9Y6G1	99 aa		10.79	□□□□□ -0.68
SEMA4D-223	ENST00000540475	NDUFB3	O43676	98 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	PRKY	O43930	277 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	ACAA1	P09110	424 aa	Predicted RBP	10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	IER3	P46695	156 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	CAV3	P56539	151 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	GNG3	P63215	75 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	RELB	Q01201	579 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	LRRC10	Q5BKY1	277 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	LCN1P1	Q5VSP4	162 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	AADACL4	Q5VUY2	407 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	SLX4IP	Q5VYV7	408 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	MEPCE	Q7L2J0	689 aa	Known RBP	10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	VMO1	Q7Z5L0	202 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	TBC1D15	Q8TC07	691 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	SSMEM1	Q8WWF3	244 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	DYRK2	Q92630	601 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	TAF15	Q92804	592 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	TNFRSF14	Q92956	283 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	MED30	Q96HR3	178 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	GAFA1	Q96PS6	74 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	MNT	Q99583	582 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	PBOV1	Q9GZY1	135 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	C1RL	Q9NZP8	487 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	NUFIP1	Q9UHK0	495 aa	Known RBP	10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	ZNF222	Q9UK12	451 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	COPS3	Q9UNS2	423 aa		10.78	□□□□□ -0.68
SEMA4D-223	ENST00000540475	DSCAML1	Q8TD84	2053 aa		10.77	□□□□□ -0.69
SEMA4D-223	ENST00000540475	OR5B21	A6NL26	309 aa		10.77	□□□□□ -0.69
SEMA4D-223	ENST00000540475	ZAR1L	A6NP61	321 aa		10.77	□□□□□ -0.69
SEMA4D-223	ENST00000540475	SIGLEC5	O15389	551 aa		10.77	□□□□□ -0.69
SEMA4D-223	ENST00000540475	RPS7	P62081	194 aa	Known RBP	10.77	□□□□□ -0.69
SEMA4D-223	ENST00000540475	RIPPLY1	Q0D2K3	151 aa		10.77	□□□□□ -0.69
SEMA4D-223	ENST00000540475	ATP6AP1	Q15904	470 aa		10.77	□□□□□ -0.69
SEMA4D-223	ENST00000540475	DGUOK	Q16854	277 aa		10.77	□□□□□ -0.69
SEMA4D-223	ENST00000540475	NXNL2	Q5VZ03	156 aa		10.77	□□□□□ -0.69
SEMA4D-223	ENST00000540475	TMEM42	Q69YG0	159 aa		10.77	□□□□□ -0.69
SEMA4D-223	ENST00000540475	C12orf73	Q69YU5	71 aa		10.77	□□□□□ -0.69
SEMA4D-223	ENST00000540475	KDM4D	Q6B0I6	523 aa		10.77	□□□□□ -0.69
SEMA4D-223	ENST00000540475	FIP1L1	Q6UN15	594 aa	Known RBP	10.77	□□□□□ -0.69
SEMA4D-223	ENST00000540475	OR5T2	Q8NGG2	359 aa		10.77	□□□□□ -0.69
SEMA4D-223	ENST00000540475	OR4F5	Q8NH21	305 aa		10.77	□□□□□ -0.69
SEMA4D-223	ENST00000540475	HIST1H2AA	Q96QV6	131 aa		10.77	□□□□□ -0.69
SEMA4D-223	ENST00000540475	GABARAPL1	Q9H0R8	117 aa		10.77	□□□□□ -0.69
SEMA4D-223	ENST00000540475	RASL12	Q9NYN1	266 aa		10.77	□□□□□ -0.69
SEMA4D-223	ENST00000540475		A0A0U1RQK1	487 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	SLC22A31	A6NKX4	558 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	OR2AT4	A6NND4	320 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	ZNF732	B4DXR9	585 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475		G3V2T6	193 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	RNASEK-C17orf49	H0YIS7	233 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475		M0R1W7	72 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	PSMD9	O00233	223 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	AKR7A2	O43488	359 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	NOS1AP	O75052	506 aa	Predicted RBP	10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	RHBDL1	O75783	438 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	DHRS3	O75911	302 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	TTR	P02766	147 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	PSG2	P11465	335 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	EPHA2	P29317	976 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	GPM6A	P51674	278 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	RIDA	P52758	137 aa	Known RBP	10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	RAG2	P55895	527 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	GUCA2A	Q02747	115 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	CMTM4	Q8IZR5	234 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	ZNF671	Q8TAW3	534 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	TMEM163	Q8TC26	289 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	AQP3	Q92482	292 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	PPP1R14A	Q96A00	147 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	SDSL	Q96GA7	329 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	CNN2	Q99439	309 aa	Known RBP	10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	PRRG3	Q9BZD7	231 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	MOB1A	Q9H8S9	216 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	BEX1	Q9HBH7	125 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	ADGRL4	Q9HBW9	690 aa		10.76	□□□□□ -0.69
SEMA4D-223	ENST00000540475	GPR84	Q9NQS5	396 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms