RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 SRRM5B3KS81 715 aa12.53□□□□□ -0.4
UBE3B-212ENST00000540230 ADAM20O43506 726 aa12.53□□□□□ -0.4
UBE3B-212ENST00000540230 RHBDL1O75783 438 aa12.53□□□□□ -0.4
UBE3B-212ENST00000540230 TFF1P04155 84 aa12.53□□□□□ -0.4
UBE3B-212ENST00000540230 ATP6V1B1P15313 513 aa12.53□□□□□ -0.4
UBE3B-212ENST00000540230 AMY2BP19961 511 aa12.53□□□□□ -0.4
UBE3B-212ENST00000540230 EPHA1P21709 976 aa12.53□□□□□ -0.4
UBE3B-212ENST00000540230 RCN1Q15293 331 aa12.53□□□□□ -0.4
UBE3B-212ENST00000540230 WDR38Q5JTN6 314 aa12.53□□□□□ -0.4
UBE3B-212ENST00000540230 Q6ZSR3 168 aa12.53□□□□□ -0.4
UBE3B-212ENST00000540230 MOB3CQ70IA8 216 aa12.53□□□□□ -0.4
UBE3B-212ENST00000540230 NLRC3Q7RTR2 1065 aa12.53□□□□□ -0.4
UBE3B-212ENST00000540230 THAP5Q7Z6K1 395 aa12.53□□□□□ -0.4
UBE3B-212ENST00000540230 PHC2Q8IXK0 858 aa12.53□□□□□ -0.4
UBE3B-212ENST00000540230 RHOXF1Q8NHV9 184 aa12.53□□□□□ -0.4
UBE3B-212ENST00000540230 LGALS12Q96DT0 336 aa12.53□□□□□ -0.4
UBE3B-212ENST00000540230 AMBNQ9NP70 447 aa12.53□□□□□ -0.4
UBE3B-212ENST00000540230 ABCB9Q9NP78 766 aa12.53□□□□□ -0.4
UBE3B-212ENST00000540230 GNG8Q9UK08 70 aa12.53□□□□□ -0.4
UBE3B-212ENST00000540230 IGHV2-70DA0A0C4DH43 119 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 RNF212BA8MTL3 300 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 ZNF732B4DXR9 585 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 SLC16A6O15403 523 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 AKR7A2O43488 359 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 SULT1C4O75897 302 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 CLIC3O95833 236 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 DBTP11182 482 aaKnown RBP12.52□□□□□ -0.4
UBE3B-212ENST00000540230 CCL1P22362 96 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 PEX2P28328 305 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 CFHR2P36980 270 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 KIR3DL2P43630 455 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 PAX8Q06710 450 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 CEACAM21Q3KPI0 293 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 KLF17Q5JT82 389 aaPredicted RBP12.52□□□□□ -0.4
UBE3B-212ENST00000540230 PLCXD3Q63HM9 321 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 TMEM42Q69YG0 159 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 RAB40AQ8WXH6 277 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 C22orf15Q8WYQ4 148 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 TECTBQ96PL2 329 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 OR51I2Q9H344 312 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 OCEL1Q9H607 264 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 GPR173Q9NS66 373 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 SMPD3Q9NY59 655 aaPredicted RBP12.52□□□□□ -0.4
UBE3B-212ENST00000540230 ENPP5Q9UJA9 477 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 EXOGQ9Y2C4 368 aaKnown RBP12.52□□□□□ -0.4
UBE3B-212ENST00000540230 MYRFQ9Y2G1 1151 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 AUP1Q9Y679 476 aa12.52□□□□□ -0.4
UBE3B-212ENST00000540230 CPT2P23786 658 aa12.52□□□□□ -0.41
UBE3B-212ENST00000540230 OR12D2P58182 307 aa12.52□□□□□ -0.41
UBE3B-212ENST00000540230 GNG3P63215 75 aa12.52□□□□□ -0.41
UBE3B-212ENST00000540230 KCNJ8Q15842 424 aa12.52□□□□□ -0.41
UBE3B-212ENST00000540230 CDONQ4KMG0 1287 aa12.52□□□□□ -0.41
UBE3B-212ENST00000540230 ZBTB37Q5TC79 503 aa12.52□□□□□ -0.41
UBE3B-212ENST00000540230 OR5T2Q8NGG2 359 aa12.52□□□□□ -0.41
UBE3B-212ENST00000540230 NANPQ8TBE9 248 aa12.52□□□□□ -0.41
UBE3B-212ENST00000540230 HIST1H2AAQ96QV6 131 aa12.52□□□□□ -0.41
UBE3B-212ENST00000540230 CCL13Q99616 98 aa12.52□□□□□ -0.41
UBE3B-212ENST00000540230 SNTG1Q9NSN8 517 aa12.52□□□□□ -0.41
UBE3B-212ENST00000540230 DAPL1A0PJW8 107 aa12.51□□□□□ -0.41
UBE3B-212ENST00000540230 TMPRSS2O15393 492 aa12.51□□□□□ -0.41
UBE3B-212ENST00000540230 TCF21O43680 179 aa12.51□□□□□ -0.41
UBE3B-212ENST00000540230 MTRF1O75570 445 aaKnown RBP12.51□□□□□ -0.41
UBE3B-212ENST00000540230 VENTXO95231 258 aa12.51□□□□□ -0.41
UBE3B-212ENST00000540230 NRASP01111 189 aa12.51□□□□□ -0.41
UBE3B-212ENST00000540230 SELLP14151 372 aa12.51□□□□□ -0.41
UBE3B-212ENST00000540230 NANOS3P60323 173 aaKnown RBP12.51□□□□□ -0.41
UBE3B-212ENST00000540230 SMN1Q16637 294 aaKnown RBP12.51□□□□□ -0.41
UBE3B-212ENST00000540230 DOK3Q7L591 496 aa12.51□□□□□ -0.41
UBE3B-212ENST00000540230 FAM220AQ7Z4H9 259 aa12.51□□□□□ -0.41
UBE3B-212ENST00000540230 RDH10Q8IZV5 341 aa12.51□□□□□ -0.41
UBE3B-212ENST00000540230 FAM216BQ8N7L0 139 aa12.51□□□□□ -0.41
UBE3B-212ENST00000540230 OR5A2Q8NGI9 324 aa12.51□□□□□ -0.41
UBE3B-212ENST00000540230 OR10Z1Q8NGY1 313 aa12.51□□□□□ -0.41
UBE3B-212ENST00000540230 NUDT16L1Q9BRJ7 211 aaKnown RBP12.51□□□□□ -0.41
UBE3B-212ENST00000540230 ZNF649Q9BS31 505 aa12.51□□□□□ -0.41
UBE3B-212ENST00000540230 TRIM36Q9NQ86 728 aa12.51□□□□□ -0.41
UBE3B-212ENST00000540230 ERVK-18Q9QC07 812 aa12.51□□□□□ -0.41
UBE3B-212ENST00000540230 KIR2DS1A0A191URI9 304 aa12.5□□□□□ -0.41
UBE3B-212ENST00000540230 DVL1O14640 695 aa12.5□□□□□ -0.41
UBE3B-212ENST00000540230 WBP4O75554 376 aaKnown RBP12.5□□□□□ -0.41
UBE3B-212ENST00000540230 MUC1P15941 1255 aaPredicted RBP12.5□□□□□ -0.41
UBE3B-212ENST00000540230 ACTC1P68032 377 aa12.5□□□□□ -0.41
UBE3B-212ENST00000540230 ACTA1P68133 377 aa12.5□□□□□ -0.41
UBE3B-212ENST00000540230 MICBQ29980 383 aa12.5□□□□□ -0.41
UBE3B-212ENST00000540230 CLVS2Q5SYC1 327 aa12.5□□□□□ -0.41
UBE3B-212ENST00000540230 STUMQ69YW2 141 aa12.5□□□□□ -0.41
UBE3B-212ENST00000540230 HAGHLQ6PII5 290 aaPredicted RBP12.5□□□□□ -0.41
UBE3B-212ENST00000540230 LHFPL3Q86UP9 236 aa12.5□□□□□ -0.41
UBE3B-212ENST00000540230 ACBD7Q8N6N7 88 aa12.5□□□□□ -0.41
UBE3B-212ENST00000540230 OR2G2Q8NGZ5 317 aa12.5□□□□□ -0.41
UBE3B-212ENST00000540230 AQP3Q92482 292 aa12.5□□□□□ -0.41
UBE3B-212ENST00000540230 C4orf36Q96KX1 117 aa12.5□□□□□ -0.41
UBE3B-212ENST00000540230 RDH12Q96NR8 316 aa12.5□□□□□ -0.41
UBE3B-212ENST00000540230 SLC6A7Q99884 636 aa12.5□□□□□ -0.41
UBE3B-212ENST00000540230 MRI1Q9BV20 369 aa12.5□□□□□ -0.41
UBE3B-212ENST00000540230 FRRS1LQ9P0K9 344 aa12.5□□□□□ -0.41
UBE3B-212ENST00000540230 KAAG1Q9UBP8 84 aa12.5□□□□□ -0.41
UBE3B-212ENST00000540230 IGHV3OR16-10A0A075B7F0 116 aa12.49□□□□□ -0.41
UBE3B-212ENST00000540230 A0A1B0GVI7 797 aa12.49□□□□□ -0.41
UBE3B-212ENST00000540230 LOC107986453A0A1B0GWG9 222 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms