RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 FTSJ1Q9UET6 329 aa5.45□□□□□ -1.54
PTPRD-214ENST00000540109 AMDHD2Q9Y303 409 aa5.45□□□□□ -1.54
PTPRD-214ENST00000540109 TRAV9-1A0A075B6T8 112 aa5.45□□□□□ -1.54
PTPRD-214ENST00000540109 TCRBV21S2A2A0A5A6 115 aa5.45□□□□□ -1.54
PTPRD-214ENST00000540109 OR52A4PA6NMU1 304 aa5.45□□□□□ -1.54
PTPRD-214ENST00000540109 CD300LBA8K4G0 201 aa5.45□□□□□ -1.54
PTPRD-214ENST00000540109 HPNP05981 417 aa5.45□□□□□ -1.54
PTPRD-214ENST00000540109 HBQ1P09105 142 aa5.45□□□□□ -1.54
PTPRD-214ENST00000540109 PGA3P0DJD8 388 aa5.45□□□□□ -1.54
PTPRD-214ENST00000540109 PMELP40967 661 aa5.45□□□□□ -1.54
PTPRD-214ENST00000540109 SEC13P55735 322 aa5.45□□□□□ -1.54
PTPRD-214ENST00000540109 IL13RA2Q14627 380 aa5.45□□□□□ -1.54
PTPRD-214ENST00000540109 IRF3Q14653 427 aa5.45□□□□□ -1.54
PTPRD-214ENST00000540109 INPP5JQ15735 1006 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-214ENST00000540109 KHDC3LQ587J8 217 aa5.45□□□□□ -1.54
PTPRD-214ENST00000540109 C12orf73Q69YU5 71 aa5.45□□□□□ -1.54
PTPRD-214ENST00000540109 GCNT2Q8N0V5 402 aa5.45□□□□□ -1.54
PTPRD-214ENST00000540109 OR1F2PQ96R84 312 aa5.45□□□□□ -1.54
PTPRD-214ENST00000540109 NMES1Q9C002 83 aa5.45□□□□□ -1.54
PTPRD-214ENST00000540109 OR10A5Q9H207 317 aa5.45□□□□□ -1.54
PTPRD-214ENST00000540109 PCM1Q15154 2024 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 ELAVL4P26378 380 aaKnown RBP5.44□□□□□ -1.54
PTPRD-214ENST00000540109 ATP1B3P54709 279 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 INSL4Q14641 139 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 SSX1Q16384 188 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 ACKR1Q16570 336 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 SLC25A35Q3KQZ1 300 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 OGFOD3Q6PK18 319 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 PRR22Q8IZ63 422 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 NUP43Q8NFH3 380 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 TMEM204Q9BSN7 226 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 TLNRD1Q9H1K6 362 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 PLEKHA3Q9HB20 300 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 LHX9Q9NQ69 397 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 CES1P1Q9UKY3 287 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 C10orf142B7Z368 130 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 FTCDNL1E5RQL4 147 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 MPIG6BO95866 241 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 IGHEP01854 428 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 ST6GAL1P15907 406 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 MESP2Q0VG99 397 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 CATR1Q13166 79 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 AARDQ4LEZ3 155 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 TMEM128Q5BJH2 165 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 ZNF770Q6IQ21 691 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-214ENST00000540109 SLC35E3Q7Z769 313 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 ZSCAN4Q8NAM6 433 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-214ENST00000540109 SDR9C7Q8NEX9 313 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 OR4K15Q8NH41 348 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 OR5B3Q8NH48 314 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 PTX4Q96A99 478 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 PIK3IP1Q96FE7 263 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 C2orf88Q9BSF0 95 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 FKRPQ9H9S5 495 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 CLEC1BQ9P126 229 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 COPS7AQ9UBW8 275 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 TINAGQ9UJW2 476 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 TCFL5Q9UL49 500 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 ZNF337Q9Y3M9 751 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 TBX6O95947 436 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-214ENST00000540109 FCER1GP30273 86 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 TRHRP34981 398 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-214ENST00000540109 FIGLAQ6QHK4 219 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 LCN15Q6UWW0 184 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 MUC20Q8N307 709 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-214ENST00000540109 ST6GALNAC3Q8NDV1 305 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 PPP1R35Q8TAP8 253 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 TMEM239Q8WW34 195 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 MRPL24Q96A35 216 aaKnown RBP5.44□□□□□ -1.54
PTPRD-214ENST00000540109 NDUFAF3Q9BU61 184 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 TMEM191AQ9H0A3 160 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 LPAR3Q9UBY5 353 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 RHBDD3Q9Y3P4 386 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 CCDC187A0A096LP49 1063 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 KIR2DS1A0A191URI9 304 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 FEZF1A0PJY2 475 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 SMIM10L1P0DMW3 83 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 RPL12P30050 165 aaKnown RBP5.44□□□□□ -1.54
PTPRD-214ENST00000540109 CRYBB2P43320 205 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 KIR2DS4P43632 304 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 CRYBA2P53672 197 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 ZNF90Q03938 601 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 KIR2DS1Q14954 304 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 SAMD13Q5VXD3 122 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 VWA1Q6PCB0 445 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 ZNF511Q8NB15 262 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 OR10A7Q8NGE5 316 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 APH1AQ96BI3 265 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 MISP3Q96FF7 219 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 SMIM10Q96HG1 83 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 MRGPRX1Q96LB2 322 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 C1orf198Q9H425 327 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 SIDT1Q9NXL6 827 aaKnown RBP5.44□□□□□ -1.54
PTPRD-214ENST00000540109 UQCR10Q9UDW1 63 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 MTFP1Q9UDX5 166 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 C19orf53Q9UNZ5 99 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-214ENST00000540109 TMEM229AB2RXF0 380 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 SLC31A1O15431 190 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 FCMRO60667 390 aa5.44□□□□□ -1.54
PTPRD-214ENST00000540109 GLSO94925 669 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms