RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 CLPSP04118 112 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 ANKRD34CP0C6C1 535 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 GABRA1P14867 456 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 TMEM128Q5BJH2 165 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 OR8G2PQ6IF36 304 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 LCN15Q6UWW0 184 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 C11orf40Q8WZ69 217 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 STRADBQ9C0K7 418 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 CHST6Q9GZX3 395 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 PLK3Q9H4B4 646 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 CA10Q9NS85 328 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 SERTAD4Q9NUC0 356 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 MRPS18AQ9NVS2 196 aaKnown RBP8.89□□□□□ -0.99
TRAF1-202ENST00000540010 FRRS1LQ9P0K9 344 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 M0R135 149 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 PTP4A3O75365 173 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 NAT1P18440 290 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 APOBEC1P41238 236 aaKnown RBP8.89□□□□□ -0.99
TRAF1-202ENST00000540010 ZNF121P58317 390 aaPredicted RBP8.89□□□□□ -0.99
TRAF1-202ENST00000540010 EFNB1P98172 346 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 TLE4Q04727 773 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 RNLSQ5VYX0 342 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 BPHLQ86WA6 291 aaPredicted RBP8.89□□□□□ -0.99
TRAF1-202ENST00000540010 ZFP62Q8NB50 900 aaPredicted RBP8.89□□□□□ -0.99
TRAF1-202ENST00000540010 OR51A2Q8NGJ7 313 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 ZNF799Q96GE5 643 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 NECAP2Q9NVZ3 263 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 OPN4Q9UHM6 478 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 GDF2Q9UK05 429 aaPredicted RBP8.89□□□□□ -0.99
TRAF1-202ENST00000540010 TMEM131Q92545 1883 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 ELLP55199 621 aaPredicted RBP8.89□□□□□ -0.99
TRAF1-202ENST00000540010 PIGPP57054 158 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 SELENOVP59797 346 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 YRDCQ86U90 279 aaKnown RBP8.89□□□□□ -0.99
TRAF1-202ENST00000540010 TMEM229BQ8NBD8 167 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 SEMA6DQ8NFY4 1073 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 OR6K3Q8NGY3 331 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 OR51F2Q8NH61 342 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 RTN4IP1Q8WWV3 396 aaPredicted RBP8.89□□□□□ -0.99
TRAF1-202ENST00000540010 SDHCQ99643 169 aaPredicted RBP8.89□□□□□ -0.99
TRAF1-202ENST00000540010 TUBAL3A6NHL2 446 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 H3BMH7 237 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 HS3ST1O14792 307 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 WNT11O96014 354 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 RBP2P50120 134 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 HMGN3Q15651 99 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 FAM199XQ6PEV8 388 aaPredicted RBP8.89□□□□□ -0.99
TRAF1-202ENST00000540010 SSX9Q7RTT3 188 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 HPSE2Q8WWQ2 592 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 RDH5Q92781 318 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 EMG1Q92979 244 aaKnown RBP8.89□□□□□ -0.99
TRAF1-202ENST00000540010 UQCC2Q9BRT2 126 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 SEMA5BQ9P283 1151 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 MCTS1Q9ULC4 181 aaKnown RBP8.89□□□□□ -0.99
TRAF1-202ENST00000540010 GAB2Q9UQC2 676 aa8.89□□□□□ -0.99
TRAF1-202ENST00000540010 WDR87Q6ZQQ6 2873 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 TUSC2O75896 110 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 NQO2P16083 231 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 CARD18P57730 90 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 PCBD1P61457 104 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 TOMM34Q15785 309 aaPredicted RBP8.88□□□□□ -0.99
TRAF1-202ENST00000540010 TMEM268Q5VZI3 342 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 RPUSD3Q6P087 351 aaKnown RBP8.88□□□□□ -0.99
TRAF1-202ENST00000540010 SPICQ8N5J4 248 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 FAM181AQ8N9Y4 354 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 NPEPL1Q8NDH3 523 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 OR52N4Q8NGI2 321 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 C2orf50Q96LR7 162 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 CCNL2Q96S94 520 aaPredicted RBP8.88□□□□□ -0.99
TRAF1-202ENST00000540010 ARRDC1-AS1Q9H2J1 176 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 GHITMQ9H3K2 345 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 GNG13Q9P2W3 67 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 ICAM5Q9UMF0 924 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 C17orf51A8MQB3 221 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 OR2J2O76002 312 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 CST7O76096 145 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 MPC2O95563 127 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 GLRA1P23415 457 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 BRICD5Q6PL45 260 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 ATG4DQ86TL0 474 aaPredicted RBP8.88□□□□□ -0.99
TRAF1-202ENST00000540010 C20orf196Q8IYI0 205 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 DTWD2Q8NBA8 298 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 OR11H4Q8NGC9 324 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 ARL5BQ96KC2 179 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 TSPAN32Q96QS1 320 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 KCNJ15Q99712 375 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 FAM234AQ9H0X4 552 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 OBP2BQ9NPH6 170 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 TMEM100Q9NV29 134 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 CEP192Q8TEP8 1941 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 ALG1L2C9J202 215 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 RER1O15258 196 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 OGG1O15527 345 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 WDR1O75083 606 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 SCGB1D1O95968 90 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 SNRPEP62304 92 aaKnown RBP8.88□□□□□ -0.99
TRAF1-202ENST00000540010 GRB2P62993 217 aaKnown RBP8.88□□□□□ -0.99
TRAF1-202ENST00000540010 FOXF1Q12946 379 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 RAB32Q13637 225 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 PDLIM3Q53GG5 364 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms