RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 CAPZA1P52907 286 aa12.59□□□□□ -0.39
UBE3B-211ENST00000539843 RELBQ01201 579 aa12.59□□□□□ -0.39
UBE3B-211ENST00000539843 MS4A2Q01362 244 aa12.59□□□□□ -0.39
UBE3B-211ENST00000539843 ZNF829Q3KNS6 432 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-211ENST00000539843 PDLIM3Q53GG5 364 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-211ENST00000539843 DEGS2Q6QHC5 323 aa12.59□□□□□ -0.39
UBE3B-211ENST00000539843 C1orf122Q6ZSJ8 110 aa12.59□□□□□ -0.39
UBE3B-211ENST00000539843 CPOQ8IVL8 374 aa12.59□□□□□ -0.39
UBE3B-211ENST00000539843 OR5T2Q8NGG2 359 aa12.59□□□□□ -0.39
UBE3B-211ENST00000539843 C8orf46Q8TAG6 207 aa12.59□□□□□ -0.39
UBE3B-211ENST00000539843 AMELYQ99218 206 aa12.59□□□□□ -0.39
UBE3B-211ENST00000539843 FAM234AQ9H0X4 552 aa12.59□□□□□ -0.39
UBE3B-211ENST00000539843 C1orf21Q9H246 121 aa12.59□□□□□ -0.39
UBE3B-211ENST00000539843 ZNRD1Q9P1U0 126 aa12.59□□□□□ -0.39
UBE3B-211ENST00000539843 LRP12Q9Y561 859 aa12.59□□□□□ -0.39
UBE3B-211ENST00000539843 TRBV23-1A0A0A0MS06 115 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 A0A1B0GW55 424 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 hCG_1809904A0A1W2PP81 198 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 A0A1W2PPE2 198 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 A0A1W2PR64 198 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 A0A1W2PRV1 198 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 MEIOCA2RUB1 952 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 OR5B21A6NL26 309 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 OR2AT4A6NND4 320 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 H0YAE9 185 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-211ENST00000539843 SIGLEC5O15389 551 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 MTRF1O75570 445 aaKnown RBP12.58□□□□□ -0.4
UBE3B-211ENST00000539843 FAM107AO95990 144 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 DUX4L2P0CJ85 424 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 DUX4L3P0CJ86 424 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 DUX4L4P0CJ87 422 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 DUX4L5P0CJ88 424 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 DUX4L6P0CJ89 424 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 DUX4L7P0CJ90 424 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 GPM6AP51674 278 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 CAV3P56539 151 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 ACTR3P61158 418 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 ACSM1Q08AH1 577 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 RIPPLY1Q0D2K3 151 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 TAF9Q16594 264 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 DUX4L9Q6RFH8 374 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-211ENST00000539843 ZNF788Q6ZQV5 615 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 PIP4P2Q8N4L2 257 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 DTX3Q8N9I9 347 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 TMEM185AQ8NFB2 350 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 OR8B12Q8NGG6 310 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 OR5D13Q8NGL4 314 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 LINC01006Q8NI28 216 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 ASB17Q8WXJ9 295 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 THTPAQ9BU02 230 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 YIPF3Q9GZM5 350 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 ZNF319Q9P2F9 582 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 DUX4Q9UBX2 424 aa12.58□□□□□ -0.4
UBE3B-211ENST00000539843 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.58□□□□□ -0.4
UBE3B-211ENST00000539843 SF3B6Q9Y3B4 125 aaKnown RBP12.58□□□□□ -0.4
UBE3B-211ENST00000539843 A0A0U1RQV5 110 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 TMEM269A0A1B0GVZ9 245 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 ZNF732B4DXR9 585 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 ZNF254O75437 659 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 CLPXO76031 633 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 ACKR3P25106 362 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 UBE2E1P51965 193 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 SNAPC1Q16533 368 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 C2orf68Q2NKX9 166 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 SMIM21Q3B7S5 101 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 DNAL1Q4LDG9 190 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 FAM76BQ5HYJ3 339 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 PLCXD3Q63HM9 321 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 SPATA24Q86W54 205 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 ADGRG5Q8IZF4 528 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 ANGPTL6Q8NI99 470 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 SEH1LQ96EE3 360 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 GAFA1Q96PS6 74 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 WDR13Q9H1Z4 485 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 RAB18Q9NP72 206 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 RASL12Q9NYN1 266 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 ENPP5Q9UJA9 477 aa12.57□□□□□ -0.4
UBE3B-211ENST00000539843 A0A1W2PRD5 423 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 A0A1W2PRF3 423 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 A0A1W2PRM7 423 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 SLC1A7O00341 560 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 ACAA1P09110 424 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-211ENST00000539843 ALOX5APP20292 161 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 DCTDP32321 178 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 SAA4P35542 130 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 RIDAP52758 137 aaKnown RBP12.56□□□□□ -0.4
UBE3B-211ENST00000539843 SRSF4Q08170 494 aaKnown RBP12.56□□□□□ -0.4
UBE3B-211ENST00000539843 APOFQ13790 326 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 FLOT2Q14254 428 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 DGUOKQ16854 277 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 CEACAM21Q3KPI0 293 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 CEP78Q5JTW2 689 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 ZNF684Q5T5D7 378 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 ZBTB37Q5TC79 503 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 FAM185AQ8N0U4 392 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 FGFRL1Q8N441 504 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 ZSCAN4Q8NAM6 433 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-211ENST00000539843 OR5A2Q8NGI9 324 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 OR51G2Q8NGK0 314 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms