RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 PRB2P02812 416 aaPredicted RBP12.42□□□□□ -0.42
USB1-203ENST00000539737 WNT2P09544 360 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 RPS2P15880 293 aaKnown RBP12.42□□□□□ -0.42
USB1-203ENST00000539737 ADARB1P78563 741 aaKnown RBP12.42□□□□□ -0.42
USB1-203ENST00000539737 FAM3AP98173 230 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 MZT1Q08AG7 82 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 RAB40BQ12829 278 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 OR8G1Q15617 311 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 OR8B8Q15620 311 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 BCL2L15Q5TBC7 163 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 LYPD2Q6UXB3 125 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 BTNL3Q6UXE8 466 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 PLEKHG7Q6ZR37 379 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 SSX6Q7RTT6 188 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 COMMD2Q86X83 199 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 CELF2-AS1Q8N7Q2 184 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 YIPF7Q8N8F6 280 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 SPERTQ8NA61 448 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 ERGIC1Q969X5 290 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 SSBP3Q9BWW4 388 aaPredicted RBP12.42□□□□□ -0.42
USB1-203ENST00000539737 PBOV1Q9GZY1 135 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 VCX3BQ9H321 246 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 ZMAT3Q9HA38 289 aaKnown RBP12.42□□□□□ -0.42
USB1-203ENST00000539737 ABCB9Q9NP78 766 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 ZNF319Q9P2F9 582 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 MIOXQ9UGB7 285 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 GTF2A1LQ9UNN4 478 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 POLR3KQ9Y2Y1 108 aaPredicted RBP12.42□□□□□ -0.42
USB1-203ENST00000539737 SNX5Q9Y5X3 404 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 HSPE1-MOB4S4R3N1 261 aa12.42□□□□□ -0.42
USB1-203ENST00000539737 DAPL1A0PJW8 107 aa12.41□□□□□ -0.42
USB1-203ENST00000539737 FADS2O95864 444 aaKnown RBP12.41□□□□□ -0.42
USB1-203ENST00000539737 SFTPBP07988 381 aa12.41□□□□□ -0.42
USB1-203ENST00000539737 ATP6V1B1P15313 513 aa12.41□□□□□ -0.42
USB1-203ENST00000539737 CA6P23280 308 aa12.41□□□□□ -0.42
USB1-203ENST00000539737 GNALP38405 381 aa12.41□□□□□ -0.42
USB1-203ENST00000539737 CD200P41217 278 aa12.41□□□□□ -0.42
USB1-203ENST00000539737 GSK3AP49840 483 aa12.41□□□□□ -0.42
USB1-203ENST00000539737 ACTA2P62736 377 aa12.41□□□□□ -0.42
USB1-203ENST00000539737 GNB2P62879 340 aa12.41□□□□□ -0.42
USB1-203ENST00000539737 ACTG2P63267 376 aa12.41□□□□□ -0.42
USB1-203ENST00000539737 MFGE8Q08431 387 aaPredicted RBP12.41□□□□□ -0.42
USB1-203ENST00000539737 KCNJ8Q15842 424 aa12.41□□□□□ -0.42
USB1-203ENST00000539737 C17orf107Q6ZR85 190 aa12.41□□□□□ -0.42
USB1-203ENST00000539737 MOGAT3Q86VF5 341 aa12.41□□□□□ -0.42
USB1-203ENST00000539737 ACBD7Q8N6N7 88 aa12.41□□□□□ -0.42
USB1-203ENST00000539737 APH1BQ8WW43 257 aa12.41□□□□□ -0.42
USB1-203ENST00000539737 ZDHHC16Q969W1 377 aa12.41□□□□□ -0.42
USB1-203ENST00000539737 UPRTQ96BW1 309 aa12.41□□□□□ -0.42
USB1-203ENST00000539737 LGALS12Q96DT0 336 aa12.41□□□□□ -0.42
USB1-203ENST00000539737 INPP5EQ9NRR6 644 aa12.41□□□□□ -0.42
USB1-203ENST00000539737 AASSQ9UDR5 926 aa12.41□□□□□ -0.42
USB1-203ENST00000539737 EXOGQ9Y2C4 368 aaKnown RBP12.41□□□□□ -0.42
USB1-203ENST00000539737 IGHV2-70DA0A0C4DH43 119 aa12.4□□□□□ -0.42
USB1-203ENST00000539737 IRGMA1A4Y4 181 aa12.4□□□□□ -0.42
USB1-203ENST00000539737 F5H5P2 479 aa12.4□□□□□ -0.42
USB1-203ENST00000539737 H0YJX3 145 aa12.4□□□□□ -0.42
USB1-203ENST00000539737 J3QRE1 110 aa12.4□□□□□ -0.42
USB1-203ENST00000539737 SRSF10O75494 262 aaKnown RBP12.4□□□□□ -0.42
USB1-203ENST00000539737 CLIC3O95833 236 aa12.4□□□□□ -0.42
USB1-203ENST00000539737 HLA-DPB1P04440 258 aa12.4□□□□□ -0.42
USB1-203ENST00000539737 PMELP40967 661 aa12.4□□□□□ -0.42
USB1-203ENST00000539737 GATA4P43694 442 aa12.4□□□□□ -0.42
USB1-203ENST00000539737 FGF12P61328 243 aa12.4□□□□□ -0.42
USB1-203ENST00000539737 ZNF85Q03923 595 aa12.4□□□□□ -0.42
USB1-203ENST00000539737 ZNF181Q2M3W8 571 aa12.4□□□□□ -0.42
USB1-203ENST00000539737 KLHL22Q53GT1 634 aa12.4□□□□□ -0.42
USB1-203ENST00000539737 ZNF684Q5T5D7 378 aa12.4□□□□□ -0.42
USB1-203ENST00000539737 ASPHD2Q6ICH7 369 aa12.4□□□□□ -0.42
USB1-203ENST00000539737 C8orf59Q8N0T1 100 aaPredicted RBP12.4□□□□□ -0.42
USB1-203ENST00000539737 OR8B3Q8NGG8 313 aa12.4□□□□□ -0.42
USB1-203ENST00000539737 DACT3Q96B18 629 aaPredicted RBP12.4□□□□□ -0.42
USB1-203ENST00000539737 NEIL1Q96FI4 390 aaPredicted RBP12.4□□□□□ -0.42
USB1-203ENST00000539737 OR8B2Q96RD0 313 aa12.4□□□□□ -0.42
USB1-203ENST00000539737 CITED1Q99966 193 aa12.4□□□□□ -0.42
USB1-203ENST00000539737 PAPOLGQ9BWT3 736 aaKnown RBP12.4□□□□□ -0.42
USB1-203ENST00000539737 TMEM165Q9HC07 324 aa12.4□□□□□ -0.42
USB1-203ENST00000539737 GNG8Q9UK08 70 aa12.4□□□□□ -0.42
USB1-203ENST00000539737 OR52A1Q9UKL2 312 aa12.4□□□□□ -0.42
USB1-203ENST00000539737 KMT2CQ8NEZ4 4911 aaKnown RBP12.4□□□□□ -0.43
USB1-203ENST00000539737 C22orf46C9J442 243 aa12.39□□□□□ -0.43
USB1-203ENST00000539737 MAGEB4O15481 346 aaPredicted RBP12.39□□□□□ -0.43
USB1-203ENST00000539737 WBP4O75554 376 aaKnown RBP12.39□□□□□ -0.43
USB1-203ENST00000539737 MTRF1O75570 445 aaKnown RBP12.39□□□□□ -0.43
USB1-203ENST00000539737 RPP14O95059 124 aaKnown RBP12.39□□□□□ -0.43
USB1-203ENST00000539737 IGHA1P01876 353 aa12.39□□□□□ -0.43
USB1-203ENST00000539737 TTRP02766 147 aa12.39□□□□□ -0.43
USB1-203ENST00000539737 ISL1P61371 349 aa12.39□□□□□ -0.43
USB1-203ENST00000539737 PRB3Q04118 309 aaPredicted RBP12.39□□□□□ -0.43
USB1-203ENST00000539737 CDONQ4KMG0 1287 aa12.39□□□□□ -0.43
USB1-203ENST00000539737 OLFML2AQ68BL7 652 aa12.39□□□□□ -0.43
USB1-203ENST00000539737 C9orf139Q6ZV77 190 aa12.39□□□□□ -0.43
USB1-203ENST00000539737 KCTD20Q7Z5Y7 419 aa12.39□□□□□ -0.43
USB1-203ENST00000539737 ELMOD2Q8IZ81 293 aa12.39□□□□□ -0.43
USB1-203ENST00000539737 PLPP7Q8NBV4 271 aa12.39□□□□□ -0.43
USB1-203ENST00000539737 OR8S1Q8NH09 359 aa12.39□□□□□ -0.43
USB1-203ENST00000539737 FAM110DQ8TAY7 271 aaPredicted RBP12.39□□□□□ -0.43
USB1-203ENST00000539737 CNIH3Q8TBE1 160 aa12.39□□□□□ -0.43
USB1-203ENST00000539737 OR51E1Q8TCB6 317 aa12.39□□□□□ -0.43
USB1-203ENST00000539737 LYZL4Q96KX0 146 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms