RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ID4P47928 161 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 GUCA2BQ16661 112 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 TMEM128Q5BJH2 165 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 LPCAT3Q6P1A2 487 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 AKR7LQ8NHP1 331 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 SSC4DQ8WTU2 575 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 ARPC5LQ9BPX5 153 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 PECRQ9BY49 303 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 PARP12Q9H0J9 701 aaKnown RBP12.31□□□□□ -0.44
UBE3B-210ENST00000539599 ZNF107Q9UII5 783 aaPredicted RBP12.31□□□□□ -0.44
UBE3B-210ENST00000539599 DNASE2O00115 360 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-210ENST00000539599 KLF7O75840 302 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-210ENST00000539599 ZNF345Q14585 488 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 TAF9Q16594 264 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 PAN3Q58A45 887 aaKnown RBP12.3□□□□□ -0.44
UBE3B-210ENST00000539599 ZNF774Q6NX45 483 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 TMEM156Q8N614 296 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 ZIC4Q8N9L1 334 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 OR9K2Q8NGE7 335 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 LHFPL5Q8TAF8 219 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 PIK3IP1Q96FE7 263 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 CYTL1Q9NRR1 136 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 DKKL1Q9UK85 242 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 C3orf80F5H4A9 247 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 M0R135 149 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 CHRM2P08172 466 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 RFPL3SP0C7P2 107 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 B4GALT1P15291 398 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 PTGER4P35408 488 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 RFC3P40938 356 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 SLC35A1P78382 337 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 H3F3AP84243 136 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 TSPO2Q5TGU0 170 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 OR56B1Q8NGI3 324 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 FGFBP3Q8TAT2 258 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 CPNE2Q96FN4 548 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-210ENST00000539599 ZNF799Q96GE5 643 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 FAAP24Q9BTP7 215 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 MOB1AQ9H8S9 216 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 WNT16Q9UBV4 365 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 C19orf25Q9UFG5 118 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-210ENST00000539599 FAM96BQ9Y3D0 163 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 IGKV1-27A0A075B6S5 117 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 TOX3O15405 576 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-210ENST00000539599 SFT2D2O95562 160 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 ICAM2P13598 275 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 NOVA1P51513 510 aaKnown RBP12.3□□□□□ -0.44
UBE3B-210ENST00000539599 SP6Q3SY56 376 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 OR2A2Q6IF42 318 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 SLC23A3Q6PIS1 610 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 PIGQQ9BRB3 760 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 SMIM3Q9BZL3 60 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 ULBP2Q9BZM5 246 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 NELFAQ9H3P2 528 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 HDGFL3Q9Y3E1 203 aa12.3□□□□□ -0.44
UBE3B-210ENST00000539599 ABCD4O14678 606 aa12.29□□□□□ -0.44
UBE3B-210ENST00000539599 DHHO43323 396 aa12.29□□□□□ -0.44
UBE3B-210ENST00000539599 GSTP1P09211 210 aaKnown RBP12.29□□□□□ -0.44
UBE3B-210ENST00000539599 TMEM225BP0DP42 221 aa12.29□□□□□ -0.44
UBE3B-210ENST00000539599 LIFP15018 202 aa12.29□□□□□ -0.44
UBE3B-210ENST00000539599 HLA-GP17693 338 aa12.29□□□□□ -0.44
UBE3B-210ENST00000539599 CCL1P22362 96 aa12.29□□□□□ -0.44
UBE3B-210ENST00000539599 MPZP25189 248 aa12.29□□□□□ -0.44
UBE3B-210ENST00000539599 ZNF169Q14929 603 aaPredicted RBP12.29□□□□□ -0.44
UBE3B-210ENST00000539599 SGK3Q96BR1 496 aa12.29□□□□□ -0.44
UBE3B-210ENST00000539599 LDAHQ9H6V9 325 aa12.29□□□□□ -0.44
UBE3B-210ENST00000539599 PRELID1Q9Y255 219 aa12.29□□□□□ -0.44
UBE3B-210ENST00000539599 BOD1L1Q8NFC6 3051 aa12.29□□□□□ -0.44
UBE3B-210ENST00000539599 TP53I11O14683 189 aa12.29□□□□□ -0.44
UBE3B-210ENST00000539599 AGPAT2O15120 278 aa12.29□□□□□ -0.44
UBE3B-210ENST00000539599 DHRS3O75911 302 aa12.29□□□□□ -0.44
UBE3B-210ENST00000539599 RPS2P15880 293 aaKnown RBP12.29□□□□□ -0.44
UBE3B-210ENST00000539599 GUCA1AP43080 201 aaPredicted RBP12.29□□□□□ -0.44
UBE3B-210ENST00000539599 C9orf135Q5VTT2 229 aa12.29□□□□□ -0.44
UBE3B-210ENST00000539599 TMEM123Q8N131 208 aa12.29□□□□□ -0.44
UBE3B-210ENST00000539599 GTPBP8Q8N3Z3 284 aaPredicted RBP12.29□□□□□ -0.44
UBE3B-210ENST00000539599 HLA-CQ95604 372 aa12.29□□□□□ -0.44
UBE3B-210ENST00000539599 TOMM40LQ969M1 308 aa12.29□□□□□ -0.44
UBE3B-210ENST00000539599 CDC6Q99741 560 aa12.29□□□□□ -0.44
UBE3B-210ENST00000539599 URM1Q9BTM9 101 aaKnown RBP12.29□□□□□ -0.44
UBE3B-210ENST00000539599 CRLF2Q9HC73 371 aa12.29□□□□□ -0.44
UBE3B-210ENST00000539599 OSGIN2Q9Y236 505 aa12.29□□□□□ -0.44
UBE3B-210ENST00000539599 CCDC187A0A096LP49 1063 aa12.28□□□□□ -0.44
UBE3B-210ENST00000539599 GRB2P62993 217 aaKnown RBP12.28□□□□□ -0.44
UBE3B-210ENST00000539599 ZNF585AQ6P3V2 769 aa12.28□□□□□ -0.44
UBE3B-210ENST00000539599 SHDQ96IW2 340 aa12.28□□□□□ -0.44
UBE3B-210ENST00000539599 IMMP1LQ96LU5 166 aa12.28□□□□□ -0.44
UBE3B-210ENST00000539599 ZNF2Q9BSG1 426 aaPredicted RBP12.28□□□□□ -0.44
UBE3B-210ENST00000539599 DUSP23Q9BVJ7 150 aa12.28□□□□□ -0.44
UBE3B-210ENST00000539599 SLC39A1Q9NY26 324 aa12.28□□□□□ -0.44
UBE3B-210ENST00000539599 ZNF407Q9C0G0 2248 aa12.28□□□□□ -0.44
UBE3B-210ENST00000539599 FOXI3A8MTJ6 420 aaPredicted RBP12.28□□□□□ -0.44
UBE3B-210ENST00000539599 PIGYQ3MUY2 71 aa12.28□□□□□ -0.44
UBE3B-210ENST00000539599 CHRFAM7AQ494W8 412 aa12.28□□□□□ -0.44
UBE3B-210ENST00000539599 VAX1Q5SQQ9 334 aa12.28□□□□□ -0.44
UBE3B-210ENST00000539599 TMEM17Q86X19 198 aa12.28□□□□□ -0.44
UBE3B-210ENST00000539599 CBLN2Q8IUK8 224 aa12.28□□□□□ -0.44
UBE3B-210ENST00000539599 ADPRHL1Q8NDY3 354 aa12.28□□□□□ -0.44
UBE3B-210ENST00000539599 GJC3Q8NFK1 279 aa12.28□□□□□ -0.44
UBE3B-210ENST00000539599 MARS2Q96GW9 593 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms