RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 TTRP02766 147 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 B4GALT1P15291 398 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 PABPC1L2AQ5JQF8 200 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 ASPHD2Q6ICH7 369 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 GABRG1Q8N1C3 465 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 GJC3Q8NFK1 279 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 GPX8Q8TED1 209 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 SLC25A32Q9H2D1 315 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 DHDHQ9UQ10 334 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 RTTNQ86VV8 2226 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 LOC107986453A0A1B0GWG9 222 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 K7EM74 188 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 SLC17A2O00624 439 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 LMX1BO60663 402 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 IGHG3P01860 377 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 HOXA1P49639 335 aaPredicted RBP14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 SSBP1Q04837 148 aaKnown RBP14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 RIPPLY2Q5TAB7 128 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 PXT1Q8NFP0 134 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 CCDC107Q8WV48 283 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 NKX6-2Q9C056 277 aaPredicted RBP14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 SLCO5A1Q9H2Y9 848 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 BCO1Q9HAY6 547 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 SLC7A10Q9NS82 523 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 UPB1Q9UBR1 384 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 HHLA2Q9UM44 414 aa14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 ANKRD11Q6UB99 2663 aaPredicted RBP14.93□□□□□ -0.02
PCDHB17P-201ENST00000539533 ISG15P05161 165 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 MELTFP08582 738 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 OR4E1P0C645 316 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 PATE4P0C8F1 98 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 ZNF121P58317 390 aaPredicted RBP14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 ACTBP60709 375 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 ACTG1P63261 375 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 LY6G6FQ5SQ64 297 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 ZNF704Q6ZNC4 412 aaPredicted RBP14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 NAA40Q86UY6 237 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 C12orf45Q8N5I9 185 aaPredicted RBP14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 TAAR6Q96RI8 345 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 FOXB1Q99853 325 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 ATG5Q9H1Y0 275 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 SLC17A5Q9NRA2 495 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 PURGQ9UJV8 347 aaKnown RBP14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 UBBP0CG47 229 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 UBCP0CG48 685 aaKnown RBP14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 MGMTP16455 207 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 RPS27AP62979 156 aaKnown RBP14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 UBA52P62987 128 aaKnown RBP14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 HIST1H3AP68431 136 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 HIST2H3PS2Q5TEC6 136 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 IGFL3Q6UXB1 125 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 HIST2H3AQ71DI3 136 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 ZNF546Q86UE3 836 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 THRSPQ92748 146 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 PARPBPQ9NWS1 579 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 ZNF319Q9P2F9 582 aa14.92□□□□□ -0.02
PCDHB17P-201ENST00000539533 ACACAQ13085 2346 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 A0A1B0GW55 424 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 TMEM82A0PJX8 343 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 ZNF724A8MTY0 619 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 H7C2Y5 167 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 DUX4L2P0CJ85 424 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 DUX4L3P0CJ86 424 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 DUX4L4P0CJ87 422 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 DUX4L5P0CJ88 424 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 DUX4L6P0CJ89 424 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 DUX4L7P0CJ90 424 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 HOXB1P14653 301 aaPredicted RBP14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 ACHEP22303 614 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 CX3CR1P49238 355 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 TAS2R19P59542 299 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 FGL1Q08830 312 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 TMEM244Q5VVB8 128 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 ZNF283Q8N7M2 679 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 OR13C3Q8NGS6 347 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 NKX3-1Q99801 234 aaPredicted RBP14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 DUX4Q9UBX2 424 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 RAB3DO95716 219 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 EIF2S3P41091 472 aaKnown RBP14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 RNPS1Q15287 305 aaKnown RBP14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 RSPO1Q2MKA7 263 aaPredicted RBP14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 C9orf135Q5VTT2 229 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 FAM166AQ6J272 317 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 NUFIP2Q7Z417 695 aaKnown RBP14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 TMED4Q7Z7H5 227 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 MCEMP1Q8IX19 187 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 SPACA3Q8IXA5 215 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 SLC22A24Q8N4F4 322 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 OR10K1Q8NGX5 313 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 SEH1LQ96EE3 360 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 RASL12Q9NYN1 266 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 PLEK2Q9NYT0 353 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 MLXQ9UH92 298 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 ZNF230Q9UIE0 474 aaPredicted RBP14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 SSUH2Q9Y2M2 353 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 ATMQ13315 3056 aa14.91□□□□□ -0.02
PCDHB17P-201ENST00000539533 SLC22A20A6NK97 555 aa14.9□□□□□ -0.02
PCDHB17P-201ENST00000539533 F5H5K5 113 aa14.9□□□□□ -0.02
PCDHB17P-201ENST00000539533 AGTR1P30556 359 aa14.9□□□□□ -0.02
PCDHB17P-201ENST00000539533 FOXG1P55316 489 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms