RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 PDCD1LG2Q9BQ51 273 aa13.19□□□□□ -0.3
RPAIN-206ENST00000539417 TMEM246Q9BRR3 403 aa13.19□□□□□ -0.3
RPAIN-206ENST00000539417 RTL8AQ9BWD3 113 aa13.19□□□□□ -0.3
RPAIN-206ENST00000539417 ANKRD60Q9BZ19 345 aa13.19□□□□□ -0.3
RPAIN-206ENST00000539417 SONP18583 2426 aaKnown RBP13.19□□□□□ -0.3
RPAIN-206ENST00000539417 ARHGAP32A7KAX9 2087 aa13.19□□□□□ -0.3
RPAIN-206ENST00000539417 PPIAL4EA0A075B759 164 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 IGHV3OR15-7A0A075B7D8 119 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 hCG_1807616A0A1W2PRN6 198 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 CEACAM18A8MTB9 384 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 PPIAL4DF5H284 164 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 RHBDL1O75783 438 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 ZFPL1O95159 310 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 LHBP01229 141 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 UBCP0CG48 685 aaKnown RBP13.18□□□□□ -0.3
RPAIN-206ENST00000539417 PPIAL4FP0DN26 164 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 ZFP36P26651 326 aaKnown RBP13.18□□□□□ -0.3
RPAIN-206ENST00000539417 VHLP40337 213 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 ZNF404Q494X3 552 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 TMEM155Q4W5P6 130 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 CLVS2Q5SYC1 327 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 ZBTB37Q5TC79 503 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 FTMTQ8N4E7 242 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 ZFP41Q8N8Y5 198 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 LINC01356Q8N9X3 169 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 OR11L1Q8NGX0 322 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 NPRL2Q8WTW4 380 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 LRRC29Q8WV35 223 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 RGP1Q92546 391 aaPredicted RBP13.18□□□□□ -0.3
RPAIN-206ENST00000539417 VCX3BQ9H321 246 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 OR51I2Q9H344 312 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 CNOT2Q9NZN8 540 aaKnown RBP13.18□□□□□ -0.3
RPAIN-206ENST00000539417 ERVK-18Q9QC07 812 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 CAB39Q9Y376 341 aaPredicted RBP13.18□□□□□ -0.3
RPAIN-206ENST00000539417 EXOSC1Q9Y3B2 195 aaKnown RBP13.18□□□□□ -0.3
RPAIN-206ENST00000539417 PPIAL4AQ9Y536 164 aa13.18□□□□□ -0.3
RPAIN-206ENST00000539417 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.18□□□□□ -0.31e-8■■■□□ 16.6
RPAIN-206ENST00000539417 EFCAB10A6NFE3 127 aa13.17□□□□□ -0.3
RPAIN-206ENST00000539417 LRRC30A6NM36 301 aa13.17□□□□□ -0.3
RPAIN-206ENST00000539417 PTGES3LE9PB15 166 aa13.17□□□□□ -0.3
RPAIN-206ENST00000539417 F5H0A9 414 aaPredicted RBP13.17□□□□□ -0.3
RPAIN-206ENST00000539417 IFNL4K9M1U5 179 aa13.17□□□□□ -0.3
RPAIN-206ENST00000539417 FCN3O75636 299 aa13.17□□□□□ -0.3
RPAIN-206ENST00000539417 TFF1P04155 84 aa13.17□□□□□ -0.3
RPAIN-206ENST00000539417 ISG15P05161 165 aa13.17□□□□□ -0.3
RPAIN-206ENST00000539417 IRF2P14316 349 aa13.17□□□□□ -0.3
RPAIN-206ENST00000539417 MDH2P40926 338 aaKnown RBP13.17□□□□□ -0.3
RPAIN-206ENST00000539417 GBX2P52951 348 aaPredicted RBP13.17□□□□□ -0.3
RPAIN-206ENST00000539417 GMFBP60983 142 aa13.17□□□□□ -0.3
RPAIN-206ENST00000539417 IL17RELQ6ZVW7 336 aa13.17□□□□□ -0.3
RPAIN-206ENST00000539417 RNF144BQ7Z419 303 aa13.17□□□□□ -0.3
RPAIN-206ENST00000539417 KLHL36Q8N4N3 616 aa13.17□□□□□ -0.3
RPAIN-206ENST00000539417 ZNF676Q8N7Q3 588 aa13.17□□□□□ -0.3
RPAIN-206ENST00000539417 TRMT10AQ8TBZ6 339 aaKnown RBP13.17□□□□□ -0.3
RPAIN-206ENST00000539417 RPS4Y2Q8TD47 263 aa13.17□□□□□ -0.3
RPAIN-206ENST00000539417 FGGYQ96C11 551 aa13.17□□□□□ -0.3
RPAIN-206ENST00000539417 WDR13Q9H1Z4 485 aa13.17□□□□□ -0.3
RPAIN-206ENST00000539417 PATZ1Q9HBE1 687 aaKnown RBP13.17□□□□□ -0.3
RPAIN-206ENST00000539417 IGKV1-27A0A075B6S5 117 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 IGKV1-9A0A0C4DH69 117 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 A0A1B0GW55 424 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 IRGMA1A4Y4 181 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 DHRS7CA6NNS2 312 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 A8MV72 311 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-206ENST00000539417 TNFRSF13BO14836 293 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-206ENST00000539417 PLPP2O43688 288 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 DUX4L2P0CJ85 424 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 DUX4L3P0CJ86 424 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 DUX4L4P0CJ87 422 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 DUX4L5P0CJ88 424 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 DUX4L6P0CJ89 424 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 DUX4L7P0CJ90 424 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 HOXB4P17483 251 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-206ENST00000539417 TMEM244Q5VVB8 128 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 DUX4L9Q6RFH8 374 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-206ENST00000539417 FAM90A1Q86YD7 464 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 C1orf87Q8N0U7 546 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 STX19Q8N4C7 294 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 OR5A2Q8NGI9 324 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 MRPL48Q96GC5 212 aaKnown RBP13.16□□□□□ -0.3
RPAIN-206ENST00000539417 CNBD2Q96M20 576 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 ZNF488Q96MN9 340 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 HIST1H2AAQ96QV6 131 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 ABCB9Q9NP78 766 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 DUX4Q9UBX2 424 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 HIVEP2P31629 2446 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 TRBV2A0A0J9YWF9 115 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 PQLC2LA1A4F0 135 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 ANKRD61A6NGH8 418 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 TMEM210A6NLX4 147 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 B4DSR2 109 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 LGALS8O00214 317 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 PHF1O43189 567 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-206ENST00000539417 AKR7A2O43488 359 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 SYNGR1O43759 233 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 GYPAP02724 150 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 CDK1P06493 297 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 MSMBP08118 114 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 WNT2P09544 360 aa13.16□□□□□ -0.3
RPAIN-206ENST00000539417 MYL12AP19105 171 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms