RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 FAM89BQ8N5H3 189 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 NAXEQ8NCW5 288 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 OR2AE1Q8NHA4 323 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 CDC6Q99741 560 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 FOXI3A8MTJ6 420 aaPredicted RBP10.48□□□□□ -0.73
CPNE8-203ENST00000538596 FGF16O43320 207 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 TPT1P13693 172 aaKnown RBP10.48□□□□□ -0.73
CPNE8-203ENST00000538596 H3F3AP84243 136 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 PNLIPRP3Q17RR3 467 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 ZNF585AQ6P3V2 769 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 PUSL1Q8N0Z8 303 aaKnown RBP10.48□□□□□ -0.73
CPNE8-203ENST00000538596 NABP1Q96AH0 204 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 TMEM218A2RU14 115 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 PMS2P1A4D2B8 440 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 DHRS7CA6NNS2 312 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 CEACAM18A8MTB9 384 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 MSTNO14793 375 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 TLX3O43711 291 aaPredicted RBP10.48□□□□□ -0.73
CPNE8-203ENST00000538596 ANGPTL7O43827 346 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 ATG12O94817 140 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 SFTPBP07988 381 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 PRF1P14222 555 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 GUCA1AP43080 201 aaPredicted RBP10.48□□□□□ -0.73
CPNE8-203ENST00000538596 CXCL12P48061 93 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 PDSS1Q5T2R2 415 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 SLC30A7Q8NEW0 376 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 STOML3Q8TAV4 291 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 SLC25A43Q8WUT9 341 aaPredicted RBP10.48□□□□□ -0.73
CPNE8-203ENST00000538596 TSNAXQ99598 290 aaKnown RBP10.48□□□□□ -0.73
CPNE8-203ENST00000538596 NELFAQ9H3P2 528 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 PROK2Q9HC23 129 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 RAB18Q9NP72 206 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 GPR173Q9NS66 373 aa10.48□□□□□ -0.73
CPNE8-203ENST00000538596 C19orf25Q9UFG5 118 aaPredicted RBP10.48□□□□□ -0.73
CPNE8-203ENST00000538596 DHRS3O75911 302 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 IGLV3-1P01715 115 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 NAT2P11245 290 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 EIF1P41567 113 aaKnown RBP10.47□□□□□ -0.73
CPNE8-203ENST00000538596 CHRFAM7AQ494W8 412 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 ACTBL2Q562R1 376 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 GJC3Q8NFK1 279 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 OR4A4PQ8NGN8 299 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 FBXO17Q96EF6 278 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 SLC26A1Q9H2B4 701 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 PLEK2Q9NYT0 353 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 NPIPA2E9PIF3 369 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 NPIPA3F8WFD2 350 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 TNFSF11O14788 317 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 ZIC3O60481 467 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 PATE4P0C8F1 98 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 FAM157CP0CG43 387 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 RCC1P18754 421 aaPredicted RBP10.47□□□□□ -0.73
CPNE8-203ENST00000538596 PTGER4P35408 488 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 RRADP55042 308 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 LSM6P62312 80 aaKnown RBP10.47□□□□□ -0.73
CPNE8-203ENST00000538596 CYCSP99999 105 aaKnown RBP10.47□□□□□ -0.73
CPNE8-203ENST00000538596 CHAF1BQ13112 559 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 PRSS54Q6PEW0 395 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 BRICD5Q6PL45 260 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 SAP25Q8TEE9 199 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 GUCD1Q96NT3 240 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 SLC6A15Q9H2J7 730 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 FAM96BQ9Y3D0 163 aa10.47□□□□□ -0.73
CPNE8-203ENST00000538596 M0R135 149 aa10.46□□□□□ -0.73
CPNE8-203ENST00000538596 TP53I11O14683 189 aa10.46□□□□□ -0.73
CPNE8-203ENST00000538596 SPRY1O43609 319 aaPredicted RBP10.46□□□□□ -0.73
CPNE8-203ENST00000538596 UMODP07911 640 aa10.46□□□□□ -0.73
CPNE8-203ENST00000538596 CD79AP11912 226 aa10.46□□□□□ -0.73
CPNE8-203ENST00000538596 ACKR3P25106 362 aa10.46□□□□□ -0.73
CPNE8-203ENST00000538596 ADH6P28332 368 aa10.46□□□□□ -0.73
CPNE8-203ENST00000538596 ZNF468Q5VIY5 522 aaPredicted RBP10.46□□□□□ -0.73
CPNE8-203ENST00000538596 LDLRAD3Q86YD5 345 aa10.46□□□□□ -0.73
CPNE8-203ENST00000538596 CBLN2Q8IUK8 224 aa10.46□□□□□ -0.73
CPNE8-203ENST00000538596 C20orf196Q8IYI0 205 aa10.46□□□□□ -0.73
CPNE8-203ENST00000538596 CLRN3Q8NCR9 226 aa10.46□□□□□ -0.73
CPNE8-203ENST00000538596 DYRK2Q92630 601 aa10.46□□□□□ -0.73
CPNE8-203ENST00000538596 ZNF799Q96GE5 643 aa10.46□□□□□ -0.73
CPNE8-203ENST00000538596 S100A13Q99584 98 aa10.46□□□□□ -0.73
CPNE8-203ENST00000538596 PIGQQ9BRB3 760 aa10.46□□□□□ -0.73
CPNE8-203ENST00000538596 AIFM2Q9BRQ8 373 aa10.46□□□□□ -0.73
CPNE8-203ENST00000538596 TMEM100Q9NV29 134 aa10.46□□□□□ -0.73
CPNE8-203ENST00000538596 ZNF705EA8MWA4 302 aaPredicted RBP10.46□□□□□ -0.74
CPNE8-203ENST00000538596 CTSSP25774 331 aa10.46□□□□□ -0.74
CPNE8-203ENST00000538596 NTF4P34130 210 aa10.46□□□□□ -0.74
CPNE8-203ENST00000538596 ZNF239Q16600 458 aaKnown RBP10.46□□□□□ -0.74
CPNE8-203ENST00000538596 MST1LQ2TV78 715 aa10.46□□□□□ -0.74
CPNE8-203ENST00000538596 HLA-BQ31612 363 aa10.46□□□□□ -0.74
CPNE8-203ENST00000538596 CCDC36Q8IYA8 594 aa10.46□□□□□ -0.74
CPNE8-203ENST00000538596 TMEM123Q8N131 208 aa10.46□□□□□ -0.74
CPNE8-203ENST00000538596 POC1AQ8NBT0 407 aa10.46□□□□□ -0.74
CPNE8-203ENST00000538596 OR9K2Q8NGE7 335 aa10.46□□□□□ -0.74
CPNE8-203ENST00000538596 ZNF2Q9BSG1 426 aaPredicted RBP10.46□□□□□ -0.74
CPNE8-203ENST00000538596 CHST5Q9GZS9 411 aa10.46□□□□□ -0.74
CPNE8-203ENST00000538596 TLNRD1Q9H1K6 362 aa10.46□□□□□ -0.74
CPNE8-203ENST00000538596 HRH4Q9H3N8 390 aa10.46□□□□□ -0.74
CPNE8-203ENST00000538596 LIME1Q9H400 295 aa10.46□□□□□ -0.74
CPNE8-203ENST00000538596 PTRH2Q9Y3E5 179 aaKnown RBP10.46□□□□□ -0.74
CPNE8-203ENST00000538596 V9GYS6 101 aa10.46□□□□□ -0.74
CPNE8-203ENST00000538596 LOC102725191A0A1B0GVB3 256 aa10.45□□□□□ -0.74
CPNE8-203ENST00000538596 DHHO43323 396 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms