RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 LAMP2P13473 410 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 UBE2NP61088 152 aaKnown RBP7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 DCAF7P61962 342 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 RPS24P62847 133 aaKnown RBP7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 OR1Q1Q15612 314 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 ZNF260Q3ZCT1 412 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 PRR27Q6MZM9 219 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 SPSB3Q6PJ21 355 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 CHST4Q8NCG5 386 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 OR2M7Q8NG81 312 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 OR4B1Q8NGF8 309 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 ZBP1Q9H171 429 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 BET1LQ9NYM9 111 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 UQCR10Q9UDW1 63 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 HEATR5AQ86XA9 2040 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 MED19A0JLT2 244 aaPredicted RBP7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 ZNF320A2RRD8 509 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 MEGF11A6BM72 1044 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 HSPB2A8KAH6 182 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 ZNF217O75362 1048 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 B3GAT3O94766 335 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 NDUFB2O95178 105 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 CD160O95971 181 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 PFN1P07737 140 aaKnown RBP7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 HOXB2P14652 356 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 TUBG1P23258 451 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 GRPRP30550 384 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 BSGP35613 385 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 RBMXP38159 391 aaKnown RBP7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 ZNF136P52737 540 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 SUPT4H1P63272 117 aaKnown RBP7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 PAFAH1B2P68402 229 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 HSPB2Q16082 182 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 ACTL10Q5JWF8 245 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 PLXDC2Q6UX71 529 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 SLC16A9Q7RTY1 509 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 METTL27Q8N6F8 245 aaPredicted RBP7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 IL22RA1Q8N6P7 574 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 PLPP7Q8NBV4 271 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 OR2G3Q8NGZ4 309 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 SGCZQ96LD1 299 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 ZDHHC6Q9H6R6 413 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 MRM2Q9UI43 246 aaKnown RBP7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 AK3Q9UIJ7 227 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 FUT9Q9Y231 359 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 WIPI2Q9Y4P8 454 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 MYO16Q9Y6X6 1858 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 A0A087WV48 116 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 GPR89AB7ZAQ6 455 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 MMP23AO75900 390 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 GPR89BP0CG08 455 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 TNFSF4P23510 183 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 SERPINA4P29622 427 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 CSNK1A1P48729 337 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 RAB11AP62491 216 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 TRA2BP62995 288 aaKnown RBP7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 MESP2Q0VG99 397 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 ZNF266Q14584 549 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 PRSS8Q16651 343 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 TMEM41BQ5BJD5 291 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 PRAMEF20Q5VT98 475 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 LRP11Q86VZ4 500 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 CISD2Q8N5K1 135 aaKnown RBP7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 ZNF784Q8NCA9 323 aaPredicted RBP7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 ZNF740Q8NDX6 193 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 OR51A4Q8NGJ6 313 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 OR5D18Q8NGL1 313 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 PPTC7Q8NI37 304 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 ADAMTS15Q8TE58 950 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 GRHL3Q8TE85 626 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 ABHD3Q8WU67 409 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 FAM216AQ8WUB2 273 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 DCBLD2Q96PD2 775 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 IL17FQ96PD4 163 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 GABRG3Q99928 467 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 C16orf70Q9BSU1 422 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 SDF2L1Q9HCN8 221 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 Q9N2K0 584 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 ZNF319Q9P2F9 582 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 C14orf166Q9Y224 244 aaKnown RBP7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 IER3IP1Q9Y5U9 82 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 ACRP10323 421 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 ARR3P36575 388 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 ACAA2P42765 397 aaKnown RBP7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 RAB28P51157 221 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 CLDN18P56856 261 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 GNB2P62879 340 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 ZNF92Q03936 586 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 VAX1Q5SQQ9 334 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 TPTE2P1Q5T6R2 138 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 LCN10Q6JVE6 187 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 TMEM184AQ6ZMB5 413 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 TPRG1Q6ZUI0 275 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 ZNF550Q7Z398 422 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 MCEMP1Q8IX19 187 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 KLHDC9Q8NEP7 349 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 OR4D5Q8NGN0 318 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 OR10S1Q8NGN2 331 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 OR10AC1Q8NH08 325 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 CLDND2Q8NHS1 167 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms