RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 OR2L13Q8N349 312 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 HAS2Q92819 552 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 SLC35E1Q96K37 410 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 HIST1H2AAQ96QV6 131 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 LYSMD1Q96S90 227 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 IKZF2Q9UKS7 526 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 PPIL1Q9Y3C6 166 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 CXorf51AA0A1B0GTR3 108 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 TMEM238C9JI98 176 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 EPPINO95925 133 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 PPBPP02775 128 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 F3P13726 295 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 AK4P27144 223 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 INSM1Q01101 510 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 CDKN3Q16667 212 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 AADACL3Q5VUY0 350 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 RNF44Q7L0R7 432 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 TRAPPC6BQ86SZ2 158 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 CHST4Q8NCG5 386 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 OR51L1Q8NGJ5 315 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 ORAOV1Q8WV07 137 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 ANKRD9Q96BM1 317 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 EID2BQ96D98 161 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 SIRT3Q9NTG7 399 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 PADI1Q9ULC6 663 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 RBM7Q9Y580 266 aaKnown RBP9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 TNFSF14O43557 240 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 IFNA21P01568 189 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 ADRA2CP18825 462 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 TUBG1P23258 451 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 GRINAQ7Z429 371 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 BPIFA2Q96DR5 249 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 MS4A6EQ96DS6 147 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 NTNG1Q9Y2I2 539 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 ANKUB1A6NFN9 424 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 ERI3O43414 337 aaKnown RBP9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 SFT2D2O95562 160 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 STATHP02808 62 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 FOLR1P15328 257 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 CEACAM8P31997 349 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 TMEM33P57088 247 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 PNRC1Q12796 327 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 KIRREL2Q6UWL6 708 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 ZNF836Q6ZNA1 936 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 TMPRSS7Q7RTY8 843 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 ADAD2Q8NCV1 583 aaKnown RBP9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 C5AR2Q9P296 337 aa9.69□□□□□ -0.86
CLSTN3-207ENST00000537408 COL4A6Q14031 1691 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 PRAMEF27A3QJZ7 478 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 OTOL1A6NHN0 477 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 H0YL77 283 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 SLC17A2O00624 439 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 UMODP07911 640 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 DTYMKP23919 212 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 ZNF41P51814 821 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 TMEM241Q24JQ0 296 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 ACOT6Q3I5F7 207 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 ZNF66Q6ZN08 573 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 OR4K13Q8NH42 304 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 ADAD1Q96M93 576 aaKnown RBP9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 OR5B12Q96R08 314 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 TBX15Q96SF7 602 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 LANCL2Q9NS86 450 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 FOXD3Q9UJU5 478 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 CLDN16Q9Y5I7 305 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 H0Y8X5 98 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 SLC16A8O95907 504 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 FBXO45P0C2W1 286 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 PMPCAQ10713 525 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 OR13H1Q8NG92 308 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 OR4X1Q8NH49 305 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 TNFRSF14Q92956 283 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 CCDC74AQ96AQ1 378 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 C16orf58Q96GQ5 468 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 RXFP3Q9NSD7 469 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 LYRM2Q9NU23 88 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 WSB1Q9Y6I7 421 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 GPR179Q6PRD1 2367 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 GPR89AB7ZAQ6 455 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 CHRM2P08172 466 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 GPR89BP0CG08 455 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 CSNK2A2P19784 350 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 TBPL1P62380 186 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 MAML2Q8IZL2 1156 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 SRD5A3Q9H8P0 318 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 TUBG2Q9NRH3 451 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 NUMA1Q14980 2115 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 TRAV27A0A087WT01 109 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 FAM230AA0A1W2PPH8 454 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 NPIPA7E9PJI5 369 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 IGHEP01854 428 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 NPIPA8P0DM63 369 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 MAKP20794 623 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 NXPE4Q6UWF7 544 aa9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 POLR3KQ9Y2Y1 108 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-207ENST00000537408 CNTRLQ7Z7A1 2325 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 SPAG17Q6Q759 2223 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 PATJQ8NI35 1801 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 KIR2DS5A0A0G2JLQ3 304 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 A0A0G2JNG1 304 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms