RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 OR4F17Q8NGA8 305 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 SPSB1Q96BD6 273 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 C8orf44Q96CB5 159 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 ASB16Q96NS5 453 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 PARD6AQ9NPB6 346 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 DCAF16Q9NXF7 216 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 B9D1Q9UPM9 204 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 K7ESM1 405 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 CST7O76096 145 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 B4GALT1P15291 398 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 ATF1P18846 271 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 NHLH1Q02575 133 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 NHLH2Q02577 135 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 DHRS11Q6UWP2 260 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 BTNL3Q6UXE8 466 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 TOMM20LQ6UXN7 152 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 ZNF66Q6ZN08 573 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 MOB3BQ86TA1 216 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 DND1Q8IYX4 353 aaKnown RBP9.58□□□□□ -0.88
CLIP1-209ENST00000537178 TCTEX1D1Q8N7M0 179 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 OR2V1Q8NHB1 315 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 TRAPPC1Q9Y5R8 145 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 CCDC187A0A096LP49 1063 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 FRG2CA6NGY1 282 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 RNASEK-C17orf49H0YIS7 233 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 LINC01387J3KSC0 135 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 BMPR1BO00238 502 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 PGA3P0DJD8 388 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 GPM6AP51674 278 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 ZNF816Q0VGE8 651 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-209ENST00000537178 EXTL1Q92935 676 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 NTNG2Q96CW9 530 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 MS4A4AQ96JQ5 239 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 PRRX2Q99811 253 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 SLC25A37Q9NYZ2 338 aa9.58□□□□□ -0.88
CLIP1-209ENST00000537178 POM121BA6NF01 834 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 ADAM11O75078 769 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 BTG2P78543 158 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 OR2A2Q6IF42 318 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 ZNF429Q86V71 674 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 OR52N4Q8NGI2 321 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 AUNIPQ9H7T9 357 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 SLCO1C1Q9NYB5 712 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 FOXJ3Q9UPW0 622 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 LSM2Q9Y333 95 aaKnown RBP9.57□□□□□ -0.88
CLIP1-209ENST00000537178 UBE2L5PA0A1B0GUS4 154 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 CLDN34H7C241 214 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 M0R1X1 148 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 UPK1AO00322 258 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 INHBBP09529 407 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 RD3LP0DJH9 198 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 ZNF77Q15935 545 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 TMEM147Q9BVK8 224 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 DICER1Q9UPY3 1922 aaKnown RBP9.57□□□□□ -0.88
CLIP1-209ENST00000537178 SCN1AP35498 2009 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 CST4P01036 141 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 MMP15P51511 669 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 AQP6Q13520 282 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 ETFRF1Q6IPR1 90 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 FAHD1Q6P587 224 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 NAT8BQ9UHF3 227 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 CYB5R1Q9UHQ9 305 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 SLC45A2Q9UMX9 530 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 TMED3Q9Y3Q3 217 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 H0Y8X5 98 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 FAHP16930 419 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 GNG3P63215 75 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 GUK1Q16774 197 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 CEACAM16Q2WEN9 425 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 ADPRHL1Q8NDY3 354 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 WSB2Q9NYS7 404 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-209ENST00000537178 FBXO4Q9UKT5 387 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 WSB1Q9Y6I7 421 aa9.57□□□□□ -0.88
CLIP1-209ENST00000537178 SBK3P0C264 359 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 NQO2P16083 231 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 HMGA1P17096 107 aaKnown RBP9.56□□□□□ -0.88
CLIP1-209ENST00000537178 BSGP35613 385 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 ZNF154Q13106 437 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 PARM1Q6UWI2 310 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 CALHM3Q86XJ0 350 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 NEIL1Q96FI4 390 aaPredicted RBP9.56□□□□□ -0.88
CLIP1-209ENST00000537178 LOXL2Q9Y4K0 774 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 KRASP01116 189 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 GP1BAP07359 652 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 PPP1CAP62136 330 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 C11orf87Q6NUJ2 197 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 OR1L4Q8NGR5 311 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 PATE1Q8WXA2 126 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 TMEM37Q8WXS4 190 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 GPR137Q96N19 417 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 RAB40CQ96S21 281 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 PHF7Q9BWX1 381 aaPredicted RBP9.56□□□□□ -0.88
CLIP1-209ENST00000537178 ARID1AO14497 2285 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 OR5AL1P0C617 328 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 ANKRD34CP0C6C1 535 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 AANATQ16613 207 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 TUSC1Q2TAM9 212 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 LINC00303Q3SY05 128 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 TMEM97Q5BJF2 176 aa9.56□□□□□ -0.88
CLIP1-209ENST00000537178 ARTNQ5T4W7 220 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms