RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 TMEM104Q8NE00 496 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 OR11H4Q8NGC9 324 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 OR4K15Q8NH41 348 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 NUDCD2Q8WVJ2 157 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 SPSB4Q96A44 273 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 APH1AQ96BI3 265 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 ZNF775Q96BV0 537 aaPredicted RBP11.85□□□□□ -0.51
SMG6-203ENST00000536871 SLC6A7Q99884 636 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 ZC4H2Q9NQZ6 224 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 U3KQ87 197 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 PCSK5Q92824 1860 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 KIAA1549Q9HCM3 1950 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 WIPF3A6NGB9 483 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 CEACAM18A8MTB9 384 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 CDRT15L2A8MXV6 281 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 E9PLN8 166 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 ATP6V1G2-DDX39BF2Z307 99 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 AKR7A2O43488 359 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 ATF4P18848 351 aaPredicted RBP11.84□□□□□ -0.51
SMG6-203ENST00000536871 ECI1P42126 302 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 RBP2P50120 134 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 MTCP1P56278 107 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 ARFRP1Q13795 201 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 OR8B8Q15620 311 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 GRK1Q15835 563 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 SNAI3Q3KNW1 292 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 SCGB2B2Q4G0G5 96 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 TSPO2Q5TGU0 170 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 NSUN5P2Q63ZY6 315 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 C11orf88Q6PI97 169 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 PLXDC2Q6UX71 529 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 SKA3Q8IX90 412 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 FTMTQ8N4E7 242 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 OR13C8Q8NGS7 320 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 CMBLQ96DG6 245 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 BORCS8Q96FH0 119 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 SPACA5Q96QH8 159 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 C1QTNF5Q9BXJ0 243 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 OPN4Q9UHM6 478 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 EDARQ9UNE0 448 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 KCNK7Q9Y2U2 307 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 ZNF175Q9Y473 711 aa11.84□□□□□ -0.51
SMG6-203ENST00000536871 FAM166BA8MTA8 275 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 I3L521 148 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 F10P00742 488 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 CSTBP04080 98 aaKnown RBP11.83□□□□□ -0.52
SMG6-203ENST00000536871 SERPINA5P05154 406 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 HLA-GP17693 338 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 NFYAP23511 347 aaPredicted RBP11.83□□□□□ -0.52
SMG6-203ENST00000536871 AGTR1P30556 359 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 ZNF81P51508 661 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 FUT6P51993 359 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 ATP1B3P54709 279 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 SNRPD2P62316 118 aaKnown RBP11.83□□□□□ -0.52
SMG6-203ENST00000536871 ARG2P78540 354 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 LGALSLQ3ZCW2 172 aaPredicted RBP11.83□□□□□ -0.52
SMG6-203ENST00000536871 ASCL4Q6XD76 172 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 PXT1Q8NFP0 134 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 OR8H1Q8NGG4 311 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 SLC6A15Q9H2J7 730 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 PLA2G3Q9NZ20 509 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 IL36GQ9NZH8 169 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 HSF4Q9ULV5 492 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 USP34Q70CQ2 3546 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 A0A0A6YYD4 124 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 ZNF816-ZNF321PA0A0X1KG74 233 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 hCG_38984A0A1B0GV85 526 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 PLSCR5A0PG75 271 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 FOXI3A8MTJ6 420 aaPredicted RBP11.83□□□□□ -0.52
SMG6-203ENST00000536871 PRSS44E7EML9 344 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 M0R233 179 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 SOCS1O15524 211 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 SSX5O60225 188 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 NRASP01111 189 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 IL2RAP01589 272 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 LIPCP11150 499 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 HRH1P35367 487 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 TMEM50BP56557 158 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 SRYQ05066 204 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 SRSF4Q08170 494 aaKnown RBP11.83□□□□□ -0.52
SMG6-203ENST00000536871 PLAC9Q5JTB6 97 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 SHEQ5VZ18 495 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 COLCA1Q6ZS62 124 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 TMED4Q7Z7H5 227 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 LYG2Q86SG7 212 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 HOGA1Q86XE5 327 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 AKR7LQ8NHP1 331 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 TERB2Q8NHR7 220 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 CCDC120Q96HB5 630 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 NICN1Q9BSH3 213 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 CHIAQ9BZP6 476 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 BANF2Q9H503 90 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 CA10Q9NS85 328 aa11.83□□□□□ -0.52
SMG6-203ENST00000536871 G3V3Q6 166 aa11.82□□□□□ -0.52
SMG6-203ENST00000536871 L7N2F9 121 aa11.82□□□□□ -0.52
SMG6-203ENST00000536871 FTH1P19P0C7X4 201 aa11.82□□□□□ -0.52
SMG6-203ENST00000536871 RRASP10301 218 aa11.82□□□□□ -0.52
SMG6-203ENST00000536871 BLVRBP30043 206 aaPredicted RBP11.82□□□□□ -0.52
SMG6-203ENST00000536871 SURF2Q15527 256 aaPredicted RBP11.82□□□□□ -0.52
SMG6-203ENST00000536871 AANATQ16613 207 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms