RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 SSC5DA1L4H1 1573 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 MBTPS2O43462 519 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 OPRK1P41145 380 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 SLC25A35Q3KQZ1 300 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 PLA1AQ53H76 456 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 TRAT1Q6PIZ9 186 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 BTNL3Q6UXE8 466 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 OR4F17Q8NGA8 305 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 PRRX2Q99811 253 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 TMPRSS5Q9H3S3 457 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 AMMECR1Q9Y4X0 333 aaPredicted RBP16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 DEFB108AA8MXU0 73 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 H3BMH7 237 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 TGOLN2O43493 480 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 FUCA1P04066 466 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 KLF3P57682 345 aaPredicted RBP16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 ETFRF1Q6IPR1 90 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 GALNT16Q8N428 558 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 OR2M7Q8NG81 312 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 OR10D3Q8NH80 312 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 UBALD1Q8TB05 177 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 RPP25Q9BUL9 199 aaKnown RBP16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 TNFSF14O43557 240 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 TMIGD3P0DMS9 266 aaPredicted RBP16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 PRRX1P54821 245 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 CDK5Q00535 292 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 ACSM6Q6P461 480 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 DOK1Q99704 481 aa16.26■□□□□ 0.19
SFSWAP-203ENST00000535236 TOGARAM1Q9Y4F4 1720 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 IGHV1OR15-9A0A0B4J2B8 117 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 DUS4LO95620 317 aaKnown RBP16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 COX7A1P24310 79 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 TGFBR1P36897 503 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 GRAMD2BQ96HH9 432 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 WBP1LQ9NX94 342 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 ICAM5Q9UMF0 924 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 ADRB1P08588 477 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 Q1RN00 199 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 LRRC29Q8WV35 223 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 TM4SF19Q96DZ7 209 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 FCGR3BO75015 233 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 RAB7AP51149 207 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 SLC25A1P53007 311 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 CLDN20P56880 219 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 FMODQ06828 376 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 PABPC1L2AQ5JQF8 200 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 ZNF774Q6NX45 483 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 LRRTM1Q86UE6 522 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 YBX2Q9Y2T7 364 aaKnown RBP16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 LYZL6O75951 148 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 NXPH1P58417 271 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 PDCD1Q15116 288 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 BAK1Q16611 211 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 GPBAR1Q8TDU6 330 aa16.25■□□□□ 0.19
SFSWAP-203ENST00000535236 TOX4O94842 621 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 GUCA2AQ02747 115 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 TMEM128Q5BJH2 165 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 SSX7Q7RTT5 188 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 C11orf42Q8N5U0 333 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 ARID1BQ8NFD5 2236 aaPredicted RBP16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 ZNF320A2RRD8 509 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 PTTG1IPP53801 180 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 PCBP4P57723 403 aaKnown RBP16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 ARRDC1Q8N5I2 433 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 OR5D13Q8NGL4 314 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 PSG11Q9UQ72 335 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 LSM2Q9Y333 95 aaKnown RBP16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 DNASE2O00115 360 aaPredicted RBP16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 EPPINO95925 133 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 MDH2P40926 338 aaKnown RBP16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 TMEM65Q6PI78 240 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 MAMSTRQ6ZN01 415 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 OR2W3Q7Z3T1 314 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 CADM3Q8N126 398 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 PPP1R1CQ8WVI7 109 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 WDR61Q9GZS3 305 aaKnown RBP16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 ZNF32P17041 273 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 CEACAM3P40198 252 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 SMOC1Q9H4F8 434 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 MAST2Q6P0Q8 1798 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 DHRS3O75911 302 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 KCNJ3P48549 501 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 ERVFC1-1P60608 527 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 SPNS2Q8IVW8 549 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 RAB1CQ92928 201 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 KLK11Q9UBX7 282 aa16.24■□□□□ 0.19
SFSWAP-203ENST00000535236 RER1O15258 196 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 OR3A4PP47883 348 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 CLEC12BQ2HXU8 276 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 TMEM92Q6UXU6 159 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 KIAA1958Q8N8K9 716 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 ASB13Q8WXK3 278 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 RGPD1P0DJD0 1748 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 hADV38S2A0JD32 116 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 CTSVO60911 334 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 CST7O76096 145 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 CD3EP07766 207 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 AMTP48728 403 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 LIMK1P53667 647 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 FAM3AP98173 230 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms