RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 FAM71F1Q96KD3 344 aaPredicted RBP8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 RAB3IPQ96QF0 476 aaPredicted RBP8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 CCL13Q99616 98 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 MICU1Q9BPX6 476 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 PAPOLGQ9BWT3 736 aaKnown RBP8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 YIPF3Q9GZM5 350 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 DNTTIP1Q9H147 329 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 YY1AP1Q9H869 796 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 ZNF556Q9HAH1 456 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 ABCB9Q9NP78 766 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 ACOXLQ9NUZ1 547 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 FAM206AQ9NX38 181 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 POMT1Q9Y6A1 747 aa8.28□□□□□ -1.08
CLSTN3-203ENST00000534830 ANXA2P2A6NMY6 339 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 DYNC1I1O14576 645 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 GYG2O15488 501 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 E2F6O75461 281 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 SRSF10O75494 262 aaKnown RBP8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 DNAJC8O75937 253 aaPredicted RBP8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 GNALP38405 381 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 ROM1Q03395 351 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 APOFQ13790 326 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 GFOD2Q3B7J2 385 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 CDONQ4KMG0 1287 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 FIP1L1Q6UN15 594 aaKnown RBP8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 ZNF788Q6ZQV5 615 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 SLC36A1Q7Z2H8 476 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 SPATA24Q86W54 205 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 LDLRAD3Q86YD5 345 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 FTMTQ8N4E7 242 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 PIP4P2Q8N4L2 257 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 FAM216BQ8N7L0 139 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 Q8N7P7 452 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 SCCPDHQ8NBX0 429 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 ANGPTL6Q8NI99 470 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 ST8SIA4Q92187 359 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 PIGCQ92535 297 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 LHX4Q969G2 390 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 ZDHHC16Q969W1 377 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 DCTN5Q9BTE1 182 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 RTL8AQ9BWD3 113 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 CADM1Q9BY67 442 aaKnown RBP8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 CHIAQ9BZP6 476 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 WDR13Q9H1Z4 485 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 TCF7L1Q9HCS4 588 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 HAO2Q9NYQ3 351 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 TVP23BQ9NYZ1 205 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 C1RLQ9NZP8 487 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 LAMP5Q9UJQ1 280 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 COPS3Q9UNS2 423 aa8.27□□□□□ -1.09
CLSTN3-203ENST00000534830 ZNF816-ZNF321PA0A0X1KG74 233 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 SIGLEC5O15389 551 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 GSC2O15499 205 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 ZNF254O75437 659 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 NDUFA7O95182 113 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 SELLP14151 372 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 ATP6V1B1P15313 513 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 IER3P46695 156 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 RPL15P61313 204 aaKnown RBP8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 ESRRGP62508 458 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 PTGES3Q15185 160 aaKnown RBP8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 SNAPC1Q16533 368 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 CEACAM21Q3KPI0 293 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 Q6ZSR3 168 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 REC114Q7Z4M0 266 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 VMO1Q7Z5L0 202 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 KRT77Q7Z794 578 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 ZDHHC23Q8IYP9 409 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 ZNF679Q8IYX0 411 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 OR5T2Q8NGG2 359 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 OR5K1Q8NHB7 308 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 BCAS4Q8TDM0 211 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 NPRL2Q8WTW4 380 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 TNFRSF14Q92956 283 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 RNF170Q96K19 258 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 GAFA1Q96PS6 74 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 OR8B4Q96RC9 309 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 OR51I2Q9H344 312 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 PAPOLBQ9NRJ5 636 aaKnown RBP8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 KIF17Q9P2E2 1029 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 RNF114Q9Y508 228 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 DSCAML1Q8TD84 2053 aa8.26□□□□□ -1.09
CLSTN3-203ENST00000534830 A0A0U1RQK1 487 aa8.25□□□□□ -1.09
CLSTN3-203ENST00000534830 A0A1B0GVI7 797 aa8.25□□□□□ -1.09
CLSTN3-203ENST00000534830 TMEM269A0A1B0GVZ9 245 aa8.25□□□□□ -1.09
CLSTN3-203ENST00000534830 PSMD9O00233 223 aa8.25□□□□□ -1.09
CLSTN3-203ENST00000534830 PLXNB1O43157 2135 aa8.25□□□□□ -1.09
CLSTN3-203ENST00000534830 AKR7A2O43488 359 aa8.25□□□□□ -1.09
CLSTN3-203ENST00000534830 NDUFB3O43676 98 aa8.25□□□□□ -1.09
CLSTN3-203ENST00000534830 PRKYO43930 277 aa8.25□□□□□ -1.09
CLSTN3-203ENST00000534830 RHBDL1O75783 438 aa8.25□□□□□ -1.09
CLSTN3-203ENST00000534830 ACAA1P09110 424 aaPredicted RBP8.25□□□□□ -1.09
CLSTN3-203ENST00000534830 EPHA2P29317 976 aa8.25□□□□□ -1.09
CLSTN3-203ENST00000534830 MAP2K3P46734 347 aa8.25□□□□□ -1.09
CLSTN3-203ENST00000534830 GPM6AP51674 278 aa8.25□□□□□ -1.09
CLSTN3-203ENST00000534830 CAV3P56539 151 aa8.25□□□□□ -1.09
CLSTN3-203ENST00000534830 LOXL3P58215 753 aa8.25□□□□□ -1.09
CLSTN3-203ENST00000534830 RPS7P62081 194 aaKnown RBP8.25□□□□□ -1.09
CLSTN3-203ENST00000534830 BNIP1Q12981 228 aa8.25□□□□□ -1.09
CLSTN3-203ENST00000534830 DGUOKQ16854 277 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms