RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	RTP5	Q14D33	572 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	SLC38A6	Q8IZM9	456 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	LFNG	Q8NES3	379 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	PILRB	Q9UKJ0	227 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	TRAV1-2	A0A0B4J238	106 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	ATXN7	O15265	892 aa	Predicted RBP	14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	ZNF816	Q0VGE8	651 aa	Predicted RBP	14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	CD276	Q5ZPR3	534 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	VSTM2L	Q96N03	204 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	C20orf141	Q9NUB4	165 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	OR6C3	Q9NZP0	311 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	ABCA3	Q99758	1704 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	S100A11	P31949	105 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	SSBP1	Q04837	148 aa	Known RBP	14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	KISS1	Q15726	138 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	TMEM65	Q6PI78	240 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	NPAP1	Q9NZP6	1156 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	TPR	P12270	2363 aa	Known RBP	14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	TAAR5	O14804	337 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	SSSCA1	O60232	199 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	LRP3	O75074	770 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	SIX6	O95475	246 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	OR2W3	Q7Z3T1	314 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	TMEM179B	Q7Z7N9	219 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	OR4Q3	Q8NH05	313 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	OR8U1	Q8NH10	309 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	GMPPA	Q96IJ6	420 aa	Predicted RBP	14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	OCEL1	Q9H607	264 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	EPOP	A6NHQ4	379 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	MB	P02144	154 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	SLC37A1	P57057	533 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	PSENEN	Q9NZ42	101 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532		H3BMH7	237 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	OR7C2	O60412	319 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	CCL2	P13500	99 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	DBX2	Q6ZNG2	339 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	TAF9B	Q9HBM6	251 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	THYN1	Q9P016	225 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	POM121C	A8CG34	1229 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	IAPP	P10997	89 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	C1orf185	Q5T7R7	199 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	MED30	Q96HR3	178 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	UQCC2	Q9BRT2	126 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	ZNF831	Q5JPB2	1677 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	C20orf202	A1L168	122 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	OR5H14	A6NHG9	310 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	OR5H1	A6NKK0	313 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	H2AFB1	P0C5Y9	115 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	MCCD1	P59942	119 aa	Predicted RBP	14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	TIGIT	Q495A1	244 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532		Q56UQ5	140 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	PLPPR2	Q96GM1	343 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	ACTR3C	Q9C0K3	210 aa	Predicted RBP	14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	TIMM9	Q9Y5J7	89 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532		A0A1B0GTH9	108 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	XKRY2	A2RUG3	117 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	LIPT2	A6NK58	231 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	COX7A2P2	O60397	106 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	C12orf73	Q69YU5	71 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	MRM1	Q6IN84	353 aa	Known RBP	14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	ERGIC1	Q969X5	290 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	ZNF501	Q96CX3	271 aa	Predicted RBP	14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	PRDM6	Q9NQX0	595 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	MED9	Q9NWA0	146 aa		14	□□□□□ -0.17
NCAPD3-213	ENST00000534532	DNPH1	O43598	174 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	PATE4	P0C8F1	98 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	RPS10	P46783	165 aa	Known RBP	13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	OR3A4P	P47883	348 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	RFESD	Q8TAC1	157 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	ZG16B	Q96DA0	208 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	ZNF785	A8K8V0	405 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	LINC00299	Q6ZSB3	139 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	TIPARP	Q7Z3E1	657 aa	Known RBP	13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	PTPMT1	Q8WUK0	201 aa	Predicted RBP	13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	SLC6A13	Q9NSD5	602 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	JTB	O76095	146 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	PI3	P19957	117 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	WDR38	Q5JTN6	314 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	MARCH1	Q8TCQ1	289 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	YIPF5	Q969M3	257 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532		E5RGE8	158 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	CYR61	O00622	381 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	CD3D	P04234	171 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	LIF	P15018	202 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	PAX6	P26367	422 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	CEACAM6	P40199	344 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	PLA1A	Q53H76	456 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	HEXA-AS1	Q9H8Q6	139 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	PLEKHA2	Q9HB19	425 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	NSG2	Q9Y328	171 aa		13.99	□□□□□ -0.17
NCAPD3-213	ENST00000534532	IL5	P05113	134 aa		13.98	□□□□□ -0.17
NCAPD3-213	ENST00000534532	OR4A8	P0C604	315 aa		13.98	□□□□□ -0.17
NCAPD3-213	ENST00000534532	COX5A	P20674	150 aa		13.98	□□□□□ -0.17
NCAPD3-213	ENST00000534532	PSG6	Q00889	435 aa		13.98	□□□□□ -0.17
NCAPD3-213	ENST00000534532	ADIRF	Q15847	76 aa		13.98	□□□□□ -0.17
NCAPD3-213	ENST00000534532	INO80C	Q6PI98	192 aa	Predicted RBP	13.98	□□□□□ -0.17
NCAPD3-213	ENST00000534532	GRAMD2B	Q96HH9	432 aa		13.98	□□□□□ -0.17
NCAPD3-213	ENST00000534532	SIRT5	Q9NXA8	310 aa		13.98	□□□□□ -0.17
NCAPD3-213	ENST00000534532	SPAG17	Q6Q759	2223 aa		13.98	□□□□□ -0.17
NCAPD3-213	ENST00000534532	F2RL2	O00254	374 aa		13.98	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms