RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 ZNF85Q03923 595 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 FAM76BQ5HYJ3 339 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 C12orf54Q6X4T0 127 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 KCTD8Q6ZWB6 473 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 ANGPTL5Q86XS5 388 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 ZNF679Q8IYX0 411 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 CD177Q8N6Q3 437 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 ZNRF1Q8ND25 227 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 OR10AC1Q8NH08 325 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 ANGPTL6Q8NI99 470 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 NPRL2Q8WTW4 380 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 ERGIC1Q969X5 290 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 WDFY2Q96P53 400 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 RAB3IPQ96QF0 476 aaPredicted RBP7.93□□□□□ -1.14
SSBP3-215ENST00000533946 CNN2Q99439 309 aaKnown RBP7.93□□□□□ -1.14
SSBP3-215ENST00000533946 SUCNR1Q9BXA5 334 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 MS4A7Q9GZW8 240 aaPredicted RBP7.93□□□□□ -1.14
SSBP3-215ENST00000533946 YY1AP1Q9H869 796 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 SIRT7Q9NRC8 400 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 HAO2Q9NYQ3 351 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 IL36RNQ9UBH0 155 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 RPUSD1Q9UJJ7 312 aaKnown RBP7.93□□□□□ -1.14
SSBP3-215ENST00000533946 ZNF391Q9UJN7 358 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 GTF2A1LQ9UNN4 478 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 PIGLQ9Y2B2 252 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 A0A0A6YYJ9 748 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 TRAV38-1A0A0B4J264 116 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 ZNF879B4DU55 563 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 RNASEK-C17orf49H0YIS7 233 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 TRIM77I1YAP6 450 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 EI24O14681 340 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 ENTPD6O75354 484 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 TOX4O94842 621 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 IGHV4-59P01825 116 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 PSG2P11465 335 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 MDKP21741 143 aaPredicted RBP7.92□□□□□ -1.14
SSBP3-215ENST00000533946 PRTN3P24158 256 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 FPR2P25090 351 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 DDOSTP39656 456 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 COMPP49747 757 aaPredicted RBP7.92□□□□□ -1.14
SSBP3-215ENST00000533946 TP53I3Q53FA7 332 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 METTL11BQ5VVY1 283 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 NXNL2Q5VZ03 156 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 HCP5Q6MZN7 132 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 RHOUQ7L0Q8 258 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 NLRC3Q7RTR2 1065 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 VMO1Q7Z5L0 202 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 CALHM1Q8IU99 346 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 ZDHHC13Q8IUH4 622 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 ZDHHC23Q8IYP9 409 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 PLPP7Q8NBV4 271 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 LY6G5BQ8NDX9 201 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 OR14K1Q8NGZ2 314 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 RORBQ92753 470 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 CENPNQ96H22 339 aaPredicted RBP7.92□□□□□ -1.14
SSBP3-215ENST00000533946 AJUBAQ96IF1 538 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 GABARAPL3Q9BY60 117 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 CHIAQ9BZP6 476 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 SLC22A4Q9H015 551 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 C14orf119Q9NWQ9 140 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 ERVK-18Q9QC07 812 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 NUFIP1Q9UHK0 495 aaKnown RBP7.92□□□□□ -1.14
SSBP3-215ENST00000533946 ZNF222Q9UK12 451 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 OR52A1Q9UKL2 312 aa7.92□□□□□ -1.14
SSBP3-215ENST00000533946 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.91□□□□□ -1.14
SSBP3-215ENST00000533946 A0A0U1RQV5 110 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 LOC110117498-PIK3R3F6TDL0 507 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 J3QRE1 110 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 ALPLP05186 524 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 MELTFP08582 738 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 HKR1P10072 659 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 GNALP38405 381 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 NANOS3P60323 173 aaKnown RBP7.91□□□□□ -1.14
SSBP3-215ENST00000533946 ACTR3P61158 418 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 UBE2V2Q15819 145 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 PLCXD3Q63HM9 321 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 HAGHLQ6PII5 290 aaPredicted RBP7.91□□□□□ -1.14
SSBP3-215ENST00000533946 CRIP3Q6Q6R5 217 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 BTNL3Q6UXE8 466 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 ZNF788Q6ZQV5 615 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 C9orf139Q6ZV77 190 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 KRT74Q7RTS7 529 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 COMMD2Q86X83 199 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 CATSPERDQ86XM0 798 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 ELMOD2Q8IZ81 293 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 SPERTQ8NA61 448 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 CSNK2A3Q8NEV1 391 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 TRMT10AQ8TBZ6 339 aaKnown RBP7.91□□□□□ -1.14
SSBP3-215ENST00000533946 AQP3Q92482 292 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 TNFRSF14Q92956 283 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 NKX3-1Q99801 234 aaPredicted RBP7.91□□□□□ -1.14
SSBP3-215ENST00000533946 MICU1Q9BPX6 476 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 RTL8AQ9BWD3 113 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 RNPEPL1Q9HAU8 725 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 AMBNQ9NP70 447 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 C19orf12Q9NSK7 152 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 ACOXLQ9NUZ1 547 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 CLN6Q9NWW5 311 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 ONECUT1Q9UBC0 465 aa7.91□□□□□ -1.14
SSBP3-215ENST00000533946 KAAG1Q9UBP8 84 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 370 ms