RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 TMIGD2Q96BF3 282 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 OR8B4Q96RC9 309 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 TTTY10Q9BZA0 68 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 PBOV1Q9GZY1 135 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 WDR13Q9H1Z4 485 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 FAM206AQ9NX38 181 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 ONECUT1Q9UBC0 465 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 DUX4Q9UBX2 424 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 KPTNQ9Y664 436 aa12.76□□□□□ -0.37
CPSF1-211ENST00000533492 A0A1B0GVI7 797 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 SLC22A31A6NKX4 558 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 ZNF732B4DXR9 585 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 MITFO75030 526 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-211ENST00000533492 ATP5HO75947 161 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 GLRA1P23415 457 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 FASP25445 335 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 TGM4P49221 684 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 GNG3P63215 75 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 ROM1Q03395 351 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 ATP6AP1Q15904 470 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 CEACAM21Q3KPI0 293 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 CEP78Q5JTW2 689 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 ATPAF1Q5TC12 328 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-211ENST00000533492 STUMQ69YW2 141 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 MOB3CQ70IA8 216 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 MEPCEQ7L2J0 689 aaKnown RBP12.75□□□□□ -0.37
CPSF1-211ENST00000533492 ZDHHC13Q8IUH4 622 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 PDZD9Q8IXQ8 264 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 ZNF671Q8TAW3 534 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 TBC1D15Q8TC07 691 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 OR51E1Q8TCB6 317 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 HPSE2Q8WWQ2 592 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 H1FXQ92522 213 aaKnown RBP12.75□□□□□ -0.37
CPSF1-211ENST00000533492 MED30Q96HR3 178 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 DMRTB1Q96MA1 342 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 RAB3IPQ96QF0 476 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-211ENST00000533492 DNTTIP1Q9H147 329 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 GPR84Q9NQS5 396 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 GTF2A1LQ9UNN4 478 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 COPS3Q9UNS2 423 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 AP4S1Q9Y587 144 aa12.75□□□□□ -0.37
CPSF1-211ENST00000533492 FAM181BA6NEQ2 426 aa12.74□□□□□ -0.37
CPSF1-211ENST00000533492 MTRF1O75570 445 aaKnown RBP12.74□□□□□ -0.37
CPSF1-211ENST00000533492 OMGP23515 440 aa12.74□□□□□ -0.37
CPSF1-211ENST00000533492 GABRA2P47869 451 aa12.74□□□□□ -0.37
CPSF1-211ENST00000533492 CXCR4P61073 352 aa12.74□□□□□ -0.37
CPSF1-211ENST00000533492 C1orf146Q5VVC0 180 aa12.74□□□□□ -0.37
CPSF1-211ENST00000533492 SLX4IPQ5VYV7 408 aa12.74□□□□□ -0.37
CPSF1-211ENST00000533492 NXNL2Q5VZ03 156 aa12.74□□□□□ -0.37
CPSF1-211ENST00000533492 ZNF322Q6U7Q0 402 aaPredicted RBP12.74□□□□□ -0.37
CPSF1-211ENST00000533492 FIP1L1Q6UN15 594 aaKnown RBP12.74□□□□□ -0.37
CPSF1-211ENST00000533492 VMO1Q7Z5L0 202 aa12.74□□□□□ -0.37
CPSF1-211ENST00000533492 BCDIN3DQ7Z5W3 292 aaKnown RBP12.74□□□□□ -0.37
CPSF1-211ENST00000533492 SLC35F2Q8IXU6 374 aa12.74□□□□□ -0.37
CPSF1-211ENST00000533492 TMEM86BQ8N661 226 aa12.74□□□□□ -0.37
CPSF1-211ENST00000533492 LY6G5BQ8NDX9 201 aa12.74□□□□□ -0.37
CPSF1-211ENST00000533492 OR5A2Q8NGI9 324 aa12.74□□□□□ -0.37
CPSF1-211ENST00000533492 TMEM163Q8TC26 289 aa12.74□□□□□ -0.37
CPSF1-211ENST00000533492 TAF15Q92804 592 aaKnown RBP eCLIP12.74□□□□□ -0.37
CPSF1-211ENST00000533492 MNTQ99583 582 aa12.74□□□□□ -0.37
CPSF1-211ENST00000533492 FGF23Q9GZV9 251 aaPredicted RBP12.74□□□□□ -0.37
CPSF1-211ENST00000533492 NLKQ9UBE8 527 aa12.74□□□□□ -0.37
CPSF1-211ENST00000533492 NUFIP1Q9UHK0 495 aaKnown RBP12.74□□□□□ -0.37
CPSF1-211ENST00000533492 ENOPH1Q9UHY7 261 aa12.74□□□□□ -0.37
CPSF1-211ENST00000533492 PIGLQ9Y2B2 252 aa12.74□□□□□ -0.37
CPSF1-211ENST00000533492 ZNF670-ZNF695F2Z2N8 137 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 LOC110117498-PIK3R3F6TDL0 507 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 M0R129 80 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 RHBDL1O75783 438 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 MELTFP08582 738 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 FCGR1AP12314 374 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 NDUFB7P17568 137 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 AMY2BP19961 511 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 MDKP21741 143 aaPredicted RBP12.73□□□□□ -0.37
CPSF1-211ENST00000533492 DMRTC1Q5HYR2 192 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 ZBTB37Q5TC79 503 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 PLCXD3Q63HM9 321 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 ZNF788Q6ZQV5 615 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 AMIGO2Q86SJ2 522 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 GID4Q8IVV7 300 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 ANGPTL6Q8NI99 470 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 SSMEM1Q8WWF3 244 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 PPP1R14AQ96A00 147 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 IL4I1Q96RQ9 567 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 APOL4Q9BPW4 351 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 DCTN5Q9BTE1 182 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 OR51I2Q9H344 312 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 SLC25A10Q9UBX3 287 aaPredicted RBP12.73□□□□□ -0.37
CPSF1-211ENST00000533492 ENPP5Q9UJA9 477 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 FAM96BQ9Y3D0 163 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 POMT1Q9Y6A1 747 aa12.73□□□□□ -0.37
CPSF1-211ENST00000533492 A0A1B0GUS0 222 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 OR5B21A6NL26 309 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 OR2AT4A6NND4 320 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 ZAR1LA6NP61 321 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 PRR32B1ATL7 298 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 DHRS3O75911 302 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 NRASP01111 189 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 ACAA1P09110 424 aaPredicted RBP12.72□□□□□ -0.37
CPSF1-211ENST00000533492 SELLP14151 372 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms