RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 COMMD4Q9H0A8 199 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 NOX3Q9HBY0 568 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 TAS2R4Q9NYW5 299 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 PIPOXQ9P0Z9 390 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 KLHL13Q9P2N7 655 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 CGGBP1Q9UFW8 167 aaPredicted RBP7.12□□□□□ -1.27
NEDD8-207ENST00000533242 TMEM14AQ9Y6G1 99 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 GGT3PA6NGU5 568 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 CFDP00746 253 aaPredicted RBP7.11□□□□□ -1.27
NEDD8-207ENST00000533242 IGHV4-31P0DP07 118 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 ZNF16P17020 682 aaPredicted RBP7.11□□□□□ -1.27
NEDD8-207ENST00000533242 SRD5A1P18405 259 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 CARD18P57730 90 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 UBE2MP61081 183 aaKnown RBP7.11□□□□□ -1.27
NEDD8-207ENST00000533242 ROM1Q03395 351 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 RASGEF1BQ0VAM2 473 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 FOXF1Q12946 379 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 OR7A5Q15622 319 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 ZNF239Q16600 458 aaKnown RBP7.11□□□□□ -1.27
NEDD8-207ENST00000533242 PLPPR5Q32ZL2 321 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 C2orf76Q3KRA6 126 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 ZBTB37Q5TC79 503 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 OLFML2AQ68BL7 652 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 OR10K2Q6IF99 312 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 C11orf71Q6IPW1 123 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 NHLRC1Q6VVB1 395 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 NUFIP2Q7Z417 695 aaKnown RBP7.11□□□□□ -1.27
NEDD8-207ENST00000533242 SLC26A10Q8NG04 563 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 OR8H1Q8NGG4 311 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 OR2T35Q8NGX2 323 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 RAB40AQ8WXH6 277 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 DVL3Q92997 716 aaPredicted RBP7.11□□□□□ -1.27
NEDD8-207ENST00000533242 SLC25A28Q96A46 364 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 SLITRK2Q9H156 845 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 NPTNQ9Y639 398 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 TMEM272A0A1B0GTI8 110 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 XRCC3O43542 346 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 ICMTO60725 284 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 OR6A2O95222 327 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 AHSA1O95433 338 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 IGHMP01871 453 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 LCN1P31025 176 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 ZNF41P51814 821 aaPredicted RBP7.11□□□□□ -1.27
NEDD8-207ENST00000533242 PUDPQ08623 228 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 PPA1Q15181 289 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 PCGF3Q3KNV8 242 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 ELFN2Q5R3F8 820 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 TMEM225Q6GV28 225 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 SLC18B1Q6NT16 456 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 ANKRD16Q6P6B7 361 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 TEX261Q6UWH6 196 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 KRT77Q7Z794 578 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 RTN4RL2Q86UN3 420 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 CATSPERDQ86XM0 798 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 ZNF680Q8NEM1 530 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 OR4C16Q8NGL9 310 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 OR52N5Q8NH56 324 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 POC1BQ8TC44 478 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 ST7LQ8TDW4 575 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 ASB10Q8WXI3 467 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 CPNE4Q96A23 557 aaPredicted RBP7.11□□□□□ -1.27
NEDD8-207ENST00000533242 RADILQ96JH8 1075 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 ZNF436Q9C0F3 470 aaPredicted RBP7.11□□□□□ -1.27
NEDD8-207ENST00000533242 TMEM185BQ9H7F4 350 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 ZMAT3Q9HA38 289 aaKnown RBP7.11□□□□□ -1.27
NEDD8-207ENST00000533242 CBLN4Q9NTU7 201 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 MRPL39Q9NYK5 338 aaKnown RBP7.11□□□□□ -1.27
NEDD8-207ENST00000533242 ING4Q9UNL4 249 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 ETV7Q9Y603 341 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 U3KQ87 197 aa7.11□□□□□ -1.27
NEDD8-207ENST00000533242 FREM1Q5H8C1 2179 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 TRAV18A0A075B6X5 111 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 ZNF814B7Z6K7 855 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 H7C417 338 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 WIPF1O43516 503 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 SULT1B1O43704 296 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 RAMP1O60894 148 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 NDUFB6O95139 128 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 MNDAP41218 407 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 ZNF81P51508 661 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 MAP2K6P52564 334 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 BLVRAP53004 296 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 GNG2P59768 71 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 POU3F1Q03052 451 aaPredicted RBP7.1□□□□□ -1.27
NEDD8-207ENST00000533242 MOGAT2Q3SYC2 334 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 THOC7Q6I9Y2 204 aaKnown RBP7.1□□□□□ -1.27
NEDD8-207ENST00000533242 GLDNQ6ZMI3 551 aaPredicted RBP7.1□□□□□ -1.27
NEDD8-207ENST00000533242 RNF144BQ7Z419 303 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 DCXRQ7Z4W1 244 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 TUSC5Q8IXB3 177 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 C10orf105Q8TEF2 133 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 ABHD3Q8WU67 409 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 FAM168AQ92567 244 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 FAM3DQ96BQ1 224 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 MNTQ99583 582 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 DHRS9Q9BPW9 319 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 CHST6Q9GZX3 395 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 RANBP3Q9H6Z4 567 aaPredicted RBP7.1□□□□□ -1.27
NEDD8-207ENST00000533242 G6PC2Q9NQR9 355 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 B3GAT1Q9P2W7 334 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms