RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 OR10D3Q8NH80 312 aa13.4□□□□□ -0.26
CACNA1E-208ENST00000533229 SPTSSAQ969W0 71 aa13.4□□□□□ -0.26
CACNA1E-208ENST00000533229 EEF1E1-BLOC1S5C9J1V9 151 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 SDCBPO00560 298 aaPredicted RBP13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 KCNAB3O43448 404 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 DNPH1O43598 174 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 HPNP05981 417 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 SLC25A4P12235 298 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 ICAM2P13598 275 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 B4GALT1P15291 398 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 SIGLEC14Q08ET2 396 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 SSPNQ14714 243 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 DBX2Q6ZNG2 339 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 GPR137CQ8N3F9 429 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 ARRDC1Q8N5I2 433 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 RELL2Q8NC24 303 aaPredicted RBP13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 OR1S1Q8NH92 325 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 FGFBP3Q8TAT2 258 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 KCNE4Q8WWG9 221 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 LINC00052Q96N35 136 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 PECRQ9BY49 303 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 GPR173Q9NS66 373 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 TMEM38BQ9NVV0 291 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 P4HTMQ9NXG6 502 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 PRR13Q9NZ81 148 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 GHRLQ9UBU3 117 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 CEACAM18A8MTB9 384 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 HPP00738 406 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 AADACL3Q5VUY0 350 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 SPINK14Q6IE38 97 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 KCNRGQ8N5I3 272 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 OR13G1Q8NGZ3 307 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 AKR7LQ8NHP1 331 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 ZNF845Q96IR2 970 aaPredicted RBP13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 ELL3Q9HB65 397 aaPredicted RBP13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 COMMD9Q9P000 198 aa13.39□□□□□ -0.27
CACNA1E-208ENST00000533229 GPR179Q6PRD1 2367 aa13.38□□□□□ -0.27
CACNA1E-208ENST00000533229 MTRF1O75570 445 aaKnown RBP13.38□□□□□ -0.27
CACNA1E-208ENST00000533229 ZNF32P17041 273 aa13.38□□□□□ -0.27
CACNA1E-208ENST00000533229 AMY2BP19961 511 aa13.38□□□□□ -0.27
CACNA1E-208ENST00000533229 SNU13P55769 128 aaKnown RBP13.38□□□□□ -0.27
CACNA1E-208ENST00000533229 RIPPLY1Q0D2K3 151 aa13.38□□□□□ -0.27
CACNA1E-208ENST00000533229 EIF3IQ13347 325 aaKnown RBP13.38□□□□□ -0.27
CACNA1E-208ENST00000533229 RAB35Q15286 201 aa13.38□□□□□ -0.27
CACNA1E-208ENST00000533229 TMEM128Q5BJH2 165 aa13.38□□□□□ -0.27
CACNA1E-208ENST00000533229 AAED1Q7RTV5 226 aa13.38□□□□□ -0.27
CACNA1E-208ENST00000533229 GALNTL5Q7Z4T8 443 aa13.38□□□□□ -0.27
CACNA1E-208ENST00000533229 C6orf201Q7Z4U5 140 aa13.38□□□□□ -0.27
CACNA1E-208ENST00000533229 LHFPL1Q86WI0 220 aa13.38□□□□□ -0.27
CACNA1E-208ENST00000533229 SEMA6DQ8NFY4 1073 aa13.38□□□□□ -0.27
CACNA1E-208ENST00000533229 ST8SIA2Q92186 375 aa13.38□□□□□ -0.27
CACNA1E-208ENST00000533229 RTBDNQ9BSG5 229 aaPredicted RBP13.38□□□□□ -0.27
CACNA1E-208ENST00000533229 TM2D1Q9BX74 207 aa13.38□□□□□ -0.27
CACNA1E-208ENST00000533229 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.38□□□□□ -0.27
CACNA1E-208ENST00000533229 TECTAO75443 2155 aa13.38□□□□□ -0.27
CACNA1E-208ENST00000533229 IGKV1-27A0A075B6S5 117 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 IGKV1D-8A0A087WSZ0 117 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 A0A0D9SG52 128 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 HTR3BO95264 441 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 APOC1P02654 83 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 CYB561P49447 251 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 SUPT4H1P63272 117 aaKnown RBP13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 FOXO1Q12778 655 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 FAM189A2Q15884 450 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 DRAM2Q6UX65 266 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 RAB11FIP2Q7L804 512 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 OR52H1Q8NGJ2 320 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 OR5H2Q8NGV7 314 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 OR1F12Q8NHA8 337 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 OR2V1Q8NHB1 315 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 ABHD3Q8WU67 409 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 REEP6Q96HR9 211 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 VRK1Q99986 396 aaPredicted RBP13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 SPRY4Q9C004 299 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 ARRDC1-AS1Q9H2J1 176 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 MED9Q9NWA0 146 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 ZNF581Q9P0T4 197 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 C13orf42A0A1B0GVH6 325 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 A0A1W2PNU3 283 aaPredicted RBP13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 CDK2AP1O14519 115 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 MSTNO14793 375 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 ANGPTL7O43827 346 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 SERPINA7P05543 415 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 CST2P09228 141 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 SERPINF1P36955 418 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 PSG4Q00888 419 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 ZNF345Q14585 488 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 ACTBL2Q562R1 376 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 FAM74A1Q5RGS3 127 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 ABLIM2Q6H8Q1 611 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 PLXDC2Q6UX71 529 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 CLEC18BQ6UXF7 455 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 PEG10Q86TG7 708 aaKnown RBP13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 TMEM185AQ8NFB2 350 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 CPT1CQ8TCG5 803 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 C10orf35Q96D05 121 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 ZNF75AQ96N20 296 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 MCTS1Q9ULC4 181 aaKnown RBP13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 OSGIN2Q9Y236 505 aa13.37□□□□□ -0.27
CACNA1E-208ENST00000533229 COL27A1Q8IZC6 1860 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms