RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 LRP12Q9Y561 859 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.5□□□□□ -1.37
CD44-232ENST00000531118 IGKV1D-17A0A075B6S4 117 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 A0A1W2PPH5 198 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 ANKRD30BLA7E2S9 258 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 FAM90A22PA8MWA6 464 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 EVPLLA8MZ36 301 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 SEC14L6B5MCN3 397 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 UBDO15205 165 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 BIRC5O15392 142 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 PSPNO60542 156 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 RHBDL1O75783 438 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 VSNL1P62760 191 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 SLC34A1Q06495 639 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 PIN1Q13526 163 aaPredicted RBP6.49□□□□□ -1.37
CD44-232ENST00000531118 ZNF273Q14593 569 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 ANKDD1AQ495B1 522 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 PAGE3Q5JUK9 113 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 PTCHD4Q6ZW05 846 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 CROCCP2Q86T23 111 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 NRMQ8IXM6 262 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 ZNRF1Q8ND25 227 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 SLC26A10Q8NG04 563 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 OR4Q3Q8NH05 313 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 SLC26A7Q8TE54 656 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 MALSU1Q96EH3 234 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 AKR1E2Q96JD6 320 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 SLC25A33Q9BSK2 321 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 NUAK2Q9H093 628 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 OPA3Q9H6K4 179 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 SCOCQ9UIL1 159 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 TNCP24821 2201 aa6.49□□□□□ -1.37
CD44-232ENST00000531118 IGLV1-36A0A0B4J1U3 117 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 OR2AT4A6NND4 320 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 EFCAB9A8MZ26 197 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 DCTN6O00399 190 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 AKR7A2O43488 359 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 SNRNP70P08621 437 aaKnown RBP6.48□□□□□ -1.37
CD44-232ENST00000531118 HCKP08631 526 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 GNALP38405 381 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 MDH1P40925 334 aaKnown RBP6.48□□□□□ -1.37
CD44-232ENST00000531118 GABRA2P47869 451 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 OR3A4PP47883 348 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 CENPAP49450 140 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 CAPZA1P52907 286 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 OR12D2P58182 307 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 RPL31P62899 125 aaKnown RBP6.48□□□□□ -1.37
CD44-232ENST00000531118 STX3Q13277 289 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 DEFB136Q30KP8 78 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 ZNF770Q6IQ21 691 aaPredicted RBP6.48□□□□□ -1.37
CD44-232ENST00000531118 PLBD1Q6P4A8 553 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 DNM1P34Q6PK57 102 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 TSEN54Q7Z6J9 526 aaKnown RBP6.48□□□□□ -1.37
CD44-232ENST00000531118 ADCK1Q86TW2 530 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 OAFQ86UD1 273 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 ZNF329Q86UD4 541 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 EGFL6Q8IUX8 553 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 ZNF695Q8IW36 515 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 OR6V1Q8N148 313 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 DPP10Q8N608 796 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 OR13D1Q8NGV5 346 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 BCAS4Q8TDM0 211 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 CAPSLQ8WWF8 208 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 RASSF5Q8WWW0 418 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 LINC00476Q8WZB0 136 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 SPDL1Q96EA4 605 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 TSSK2Q96PF2 358 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 OR52B2Q96RD2 323 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 NDEL1Q9GZM8 345 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 SH3GLB1Q9Y371 365 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 HILPDAQ9Y5L2 63 aa6.48□□□□□ -1.37
CD44-232ENST00000531118 PKHD1P08F94 4074 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 MUC4Q99102 2169 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 hCG_1809904A0A1W2PP81 198 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 A0A1W2PPE2 198 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 A0A1W2PR64 198 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 A0A1W2PRV1 198 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 HTR3EA5X5Y0 456 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 CCL24O00175 119 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 SOCS2O14508 198 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 CDC42EP2O14613 210 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 RGS16O15492 202 aaPredicted RBP6.47□□□□□ -1.37
CD44-232ENST00000531118 TBX1O43435 398 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 XRCC2O43543 280 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 OR2F2O95006 317 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 AMY1AP04745 511 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 AMY2AP04746 511 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 IGHV1-8P0DP01 117 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 KITP10721 976 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 MYF6P23409 242 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 OTX1P32242 354 aaPredicted RBP6.47□□□□□ -1.37
CD44-232ENST00000531118 GPR4P46093 362 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 DLX6P56179 175 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 MTPNP58546 118 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 STX1BP61266 288 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 NFYCQ13952 458 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 C9orf152Q5JTZ5 239 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 TMEM200BQ69YZ2 307 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 C16orf89Q6UX73 402 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 TMPRSS11FQ6ZWK6 438 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms