RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 MFNGO00587 321 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 NME2P1O60361 137 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 MRPL33O75394 65 aaKnown RBP4.85□□□□□ -1.63
PCF11-205ENST00000530906 OPN1LWP04000 364 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 AMY2AP04746 511 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 RLN1P04808 185 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 FCER2P06734 321 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 FCGR2AP12318 317 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 ZNF708P17019 499 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 CXCL3P19876 107 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 TCEA1P23193 301 aaKnown RBP4.85□□□□□ -1.63
PCF11-205ENST00000530906 ITGA3P26006 1051 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 CLDN15P56746 228 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 ZP1P60852 638 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 PLA2G7Q13093 441 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 KIR3DS1Q14943 382 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 OR1C1Q15619 314 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 KISS1Q15726 138 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 CSRP2Q16527 193 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 C4orf46Q504U0 113 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 HES3Q5TGS1 186 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 OTPQ5XKR4 325 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 B3GNTL1Q67FW5 361 aaPredicted RBP4.85□□□□□ -1.63
PCF11-205ENST00000530906 TMEM42Q69YG0 159 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 MTFR2Q6P444 385 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 C11orf88Q6PI97 169 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 ASCL4Q6XD76 172 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 IDO2Q6ZQW0 420 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 LHFPL2Q6ZUX7 228 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 NLRC3Q7RTR2 1065 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 TRAPPC6BQ86SZ2 158 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 PIP4P1Q86T03 277 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 BIVMQ86UB2 503 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 SLC25A42Q86VD7 318 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 FJX1Q86VR8 437 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 FTMTQ8N4E7 242 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 BPIFB2Q8N4F0 458 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 TMEM178AQ8NBL3 297 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 ACBD4Q8NC06 268 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 CHST4Q8NCG5 386 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 MDS2Q8NDY4 140 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 PXT1Q8NFP0 134 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 OR2AK2Q8NG84 335 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 SPSB4Q96A44 273 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 GAL3ST1Q99999 423 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 DHRS9Q9BPW9 319 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 OR2H1Q9GZK4 316 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 CHST6Q9GZX3 395 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 LPAR5Q9H1C0 372 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 SMOC1Q9H4F8 434 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 BCO1Q9HAY6 547 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 CRLF2Q9HC73 371 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 GPR35Q9HC97 309 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 DEPPQ9NTK1 212 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 ZNF224Q9NZL3 707 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 MRPL15Q9P015 296 aaKnown RBP4.85□□□□□ -1.63
PCF11-205ENST00000530906 FOXJ2Q9P0K8 574 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 SHPKQ9UHJ6 478 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 OPN4Q9UHM6 478 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 ELF5Q9UKW6 265 aaPredicted RBP4.85□□□□□ -1.63
PCF11-205ENST00000530906 HSF4Q9ULV5 492 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 EDARQ9UNE0 448 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 NOSIPQ9Y314 301 aaKnown RBP4.85□□□□□ -1.63
PCF11-205ENST00000530906 ZNF175Q9Y473 711 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 KMT2EQ8IZD2 1858 aa4.85□□□□□ -1.63
PCF11-205ENST00000530906 NCOA6Q14686 2063 aaPredicted RBP4.84□□□□□ -1.63
PCF11-205ENST00000530906 IGHV3-15A0A0B4J1V0 119 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 IGKV1-9A0A0C4DH69 117 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 A0A0G2JMM0 328 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 LOC101059948A0A1B0GTJ6 334 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 A0A1B0GW55 424 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 A0A1W2PPB8 328 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 A0A1W2PRS3 328 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 PLSCR5A0PG75 271 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 OR5H15A6NDH6 313 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 FAM90A10PA6NDY2 464 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 FAM90A18PA6NE21 464 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 FAM90A16PA6NEW6 464 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 FAM90A20PA6NIJ5 464 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 FAM90A8PA6NJQ4 464 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 FAM90A7PA6NKC0 464 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 FAM90A22PA8MWA6 464 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 KIR3DP1A8MWS1 328 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 FAM90A12PA8MX19 464 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 FAM90A5PA8MXJ8 464 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 FAM90A23PA8MXZ1 464 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 F5H5K5 113 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 G3V3Y1 287 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 H3BSH0 61 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 RRP8O43159 456 aaKnown RBP4.84□□□□□ -1.63
PCF11-205ENST00000530906 LMX1BO60663 402 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 CRTAPO75718 401 aaPredicted RBP4.84□□□□□ -1.63
PCF11-205ENST00000530906 TNFSF15O95150 251 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 MPIG6BO95866 241 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 CD8AP01732 235 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 SP1P08047 785 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 OR4E1P0C645 316 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 RFPL3SP0C7P2 107 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 FAM90A15PP0C7V4 464 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 FAM90A13PP0C7W8 464 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms