RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 LRTM2Q8N967 370 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 SLC38A4Q969I6 547 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 SLC35B4Q969S0 331 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 MRPL24Q96A35 216 aaKnown RBP5.44□□□□□ -1.54
CSDE1-213ENST00000530784 ITCHQ96J02 903 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 OXGR1Q96P68 337 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 PAIP2Q9BPZ3 127 aaKnown RBP5.44□□□□□ -1.54
CSDE1-213ENST00000530784 MRPL37Q9BZE1 423 aaKnown RBP5.44□□□□□ -1.54
CSDE1-213ENST00000530784 CENPHQ9H3R5 247 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 METTL17Q9H7H0 456 aaPredicted RBP5.44□□□□□ -1.54
CSDE1-213ENST00000530784 RNF121Q9H920 327 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 C12orf10Q9HB07 376 aa5.44□□□□□ -1.54
CSDE1-213ENST00000530784 RTTNQ86VV8 2226 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 TRAV36DV7A0A075B6V5 113 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 LOC102725191A0A1B0GVB3 256 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 A0A1B0GWA3 101 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 TMEM129A0AVI4 362 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 RAB36O95755 333 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 HLA-HP01893 362 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 VIMP08670 466 aaKnown RBP5.43□□□□□ -1.54
CSDE1-213ENST00000530784 IGFBP1P08833 259 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-213ENST00000530784 NQO1P15559 274 aaKnown RBP5.43□□□□□ -1.54
CSDE1-213ENST00000530784 GPR6P46095 362 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-213ENST00000530784 EVX1P49640 407 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 NCALDP61601 193 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 RPS23P62266 143 aaKnown RBP5.43□□□□□ -1.54
CSDE1-213ENST00000530784 ACTG1P63261 375 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 GALK2Q01415 458 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 FADDQ13158 208 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 RGNQ15493 299 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 TRMT5Q32P41 509 aaKnown RBP5.43□□□□□ -1.54
CSDE1-213ENST00000530784 FGD3Q5JSP0 725 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 HHATQ5VTY9 493 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 REP15Q6BDI9 236 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 MSANTD1Q6ZTZ1 278 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 NET1Q7Z628 596 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-213ENST00000530784 SNX32Q86XE0 403 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 C20orf196Q8IYI0 205 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 MREGQ8N565 214 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 OR6N1Q8NGY5 312 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 CLDND2Q8NHS1 167 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 MGARPQ8TDB4 240 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 CHPT1Q8WUD6 406 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 DNAJA4Q8WW22 397 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-213ENST00000530784 RDH5Q92781 318 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 MAL2Q969L2 176 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 FAM162AQ96A26 154 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 TMEM186Q96B77 213 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 ULBP2Q9BZM5 246 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 RIMS4Q9H426 269 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-213ENST00000530784 NARFLQ9H6Q4 476 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 LPAR2Q9HBW0 351 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 BCL2L10Q9HD36 194 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 B3GNT2Q9NY97 397 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 POFUT2Q9Y2G5 429 aa5.43□□□□□ -1.54
CSDE1-213ENST00000530784 IGKV1D-42A0A075B6H8 117 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 A0A087WUJ7 227 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 UBL3O95164 117 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 VENTXO95231 258 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 HPRP00739 348 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 MSMBP08118 114 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 ZNF35P13682 527 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 ETS2P15036 469 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 B4GALT1P15291 398 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 ZNF14P17017 642 aaPredicted RBP5.42□□□□□ -1.54
CSDE1-213ENST00000530784 ADRA2CP18825 462 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 TCN1P20061 433 aaPredicted RBP5.42□□□□□ -1.54
CSDE1-213ENST00000530784 HTR2AP28223 471 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 GLRXP35754 106 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 ALDH3B1P43353 468 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 POLR2JP52435 117 aaKnown RBP5.42□□□□□ -1.54
CSDE1-213ENST00000530784 SRSF9Q13242 221 aaKnown RBP eCLIP5.42□□□□□ -1.54
CSDE1-213ENST00000530784 RIGQ13278 110 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 PMS2P3Q13401 168 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 MAD2L1BPQ15013 274 aaPredicted RBP5.42□□□□□ -1.54
CSDE1-213ENST00000530784 PHYHD1Q5SRE7 291 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 ULK3Q6PHR2 472 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 PET117Q6UWS5 81 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 PRSS35Q8N3Z0 413 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 TEX29Q8N6K0 151 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 C10orf53Q8N6V4 93 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 OR4D10Q8NGI6 311 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 OR9I1Q8NGQ6 314 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 OR51F2Q8NH61 342 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 OCC1Q8TAD7 63 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 ZNF418Q8TF45 676 aaPredicted RBP5.42□□□□□ -1.54
CSDE1-213ENST00000530784 ZMYND19Q96E35 227 aaPredicted RBP5.42□□□□□ -1.54
CSDE1-213ENST00000530784 SLC41A3Q96GZ6 507 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 EMC6Q9BV81 110 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 ZNF416Q9BWM5 594 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 PLA2G12AQ9BZM1 189 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 MED29Q9NX70 200 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 SLC7A8Q9UHI5 535 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 FBXL3Q9UKT7 428 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 ZNF346Q9UL40 294 aaKnown RBP5.42□□□□□ -1.54
CSDE1-213ENST00000530784 CADP27708 2225 aa5.42□□□□□ -1.54
CSDE1-213ENST00000530784 PRORSD1PA6NEY8 169 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 ZNF726A6NNF4 738 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 F8VVB4 439 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 F8VWA3 439 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms