RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CATP04040 527 aaKnown RBP4.36□□□□□ -1.71
PCF11-202ENST00000528336 CDK1P06493 297 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 PTGDSP41222 190 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 DYNC1I2Q13409 638 aaKnown RBP4.36□□□□□ -1.71
PCF11-202ENST00000528336 UNC119Q13432 240 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 ASAH1Q13510 395 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 LTB4RQ15722 352 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 IL17AQ16552 155 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 TIMM50Q3ZCQ8 353 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 YIF1BQ5BJH7 314 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 FAM219BQ5XKK7 198 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 LPCAT4Q643R3 524 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 SPOPLQ6IQ16 392 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 PGAP1Q75T13 922 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 C11orf53Q8IXP5 236 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 C10orf67Q8IYJ2 551 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 FAM71AQ8IYT1 594 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 ZFP82Q8N141 532 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 PRELID2Q8N945 189 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 OR5L1Q8NGL2 311 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 FLVCR1-AS1Q8TAF5 88 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 SLC7A13Q8TCU3 470 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 CXorf40AQ8TE69 158 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 RNF138Q8WVD3 245 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 CCDC42Q96M95 316 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 FAM173AQ9BQD7 235 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 AGMATQ9BSE5 352 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 COPS4Q9BT78 406 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 ZBP1Q9H171 429 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 PPDPFQ9H3Y8 114 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 TMEM38AQ9H6F2 299 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 ADGRL4Q9HBW9 690 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 TMBIM4Q9HC24 238 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 EML4Q9HC35 981 aaKnown RBP4.36□□□□□ -1.71
PCF11-202ENST00000528336 SLC25A37Q9NYZ2 338 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 CIDEBQ9UHD4 219 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 OPN4Q9UHM6 478 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 MROH7Q68CQ1 1323 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 IGSF9BQ9UPX0 1349 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 TRAV8-7A0A075B6U6 113 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 FUOMA2VDF0 154 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 USP27XA6NNY8 438 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 HACD1B0YJ81 288 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 C9J4A7 227 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 H3BNH8 94 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 M0QZ92 97 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 TGOLN2O43493 480 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 AQP8O94778 261 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 IGHV2-5P01817 119 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 TNNC2P02585 160 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 SERPINA5P05154 406 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 SNRPAP09012 282 aaKnown RBP4.35□□□□□ -1.71
PCF11-202ENST00000528336 SMIM10L2AP0DMW4 78 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 SMIM10L2BP0DMW5 78 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 IGFBP3P17936 291 aaPredicted RBP4.35□□□□□ -1.71
PCF11-202ENST00000528336 CSNK2A2P19784 350 aaPredicted RBP4.35□□□□□ -1.71
PCF11-202ENST00000528336 M6PRP20645 277 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 GTF2A1P52655 376 aaPredicted RBP4.35□□□□□ -1.71
PCF11-202ENST00000528336 OR10A3P58181 314 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 RAB4BP61018 213 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 RPL31P62899 125 aaKnown RBP4.35□□□□□ -1.71
PCF11-202ENST00000528336 MLLT11Q13015 90 aaPredicted RBP4.35□□□□□ -1.71
PCF11-202ENST00000528336 FLOT2Q14254 428 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 LRRC26Q2I0M4 334 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 TMEM176BQ3YBM2 270 aaPredicted RBP4.35□□□□□ -1.71
PCF11-202ENST00000528336 CPTPQ5TA50 214 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 OR52E8Q6IFG1 317 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 APOOLQ6UXV4 268 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 BAIAP2L2Q6UXY1 529 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 PRSS48Q7RTY5 328 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 CALHM1Q8IU99 346 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 PDIK1LQ8N165 341 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 RIBC1Q8N443 379 aaPredicted RBP4.35□□□□□ -1.71
PCF11-202ENST00000528336 LINC00301Q8NCQ3 95 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 OR9A4Q8NGU2 314 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 FNDC8Q8TC99 324 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 DYNC2LI1Q8TCX1 351 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 TFB1MQ8WVM0 346 aaKnown RBP4.35□□□□□ -1.71
PCF11-202ENST00000528336 PYDC1Q8WXC3 89 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 OR5P2Q8WZ92 322 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 AP3S1Q92572 193 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 WFIKKN1Q96NZ8 548 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 OR8B4Q96RC9 309 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 STACQ99469 402 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 LXNQ9BS40 222 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 HCAR1Q9BXC0 346 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 LHX5Q9H2C1 402 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 RBKSQ9H477 322 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 ZNF385DQ9H6B1 395 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 ZDHHC4Q9NPG8 344 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 MEPEQ9NQ76 525 aaPredicted RBP4.35□□□□□ -1.71
PCF11-202ENST00000528336 SDHAF2Q9NX18 166 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 EHFQ9NZC4 300 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 GUCA1BQ9UMX6 200 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 SNX24Q9Y343 169 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 NRCAMQ92823 1304 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 COL1A2P08123 1366 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 DNAH12Q6ZR08 3092 aa4.35□□□□□ -1.71
PCF11-202ENST00000528336 SCN10AQ9Y5Y9 1956 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms