RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 RTBDNQ9BSG5 229 aaPredicted RBP11.04□□□□□ -0.64
CAPN1-208ENST00000527323 URM1Q9BTM9 101 aaKnown RBP11.04□□□□□ -0.64
CAPN1-208ENST00000527323 SLC5A7Q9GZV3 580 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 ELL3Q9HB65 397 aaPredicted RBP11.04□□□□□ -0.64
CAPN1-208ENST00000527323 FER1L5A0AVI2 2057 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 IGHV3-20A0A0C4DH32 117 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 SGCEO43556 437 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 FPR2P25090 351 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 PPT1P50897 306 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 SNU13P55769 128 aaKnown RBP11.04□□□□□ -0.64
CAPN1-208ENST00000527323 SUPT4H1P63272 117 aaKnown RBP11.04□□□□□ -0.64
CAPN1-208ENST00000527323 PCK2Q16822 640 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 LCN10Q6JVE6 187 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 OR56B1Q8NGI3 324 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 OR13G1Q8NGZ3 307 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 SMIM8Q96KF7 97 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 CHST11Q9NPF2 352 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 GPR84Q9NQS5 396 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 C10orf142B7Z368 130 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 CPT2P23786 658 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 CDAP32320 146 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 SLC6A9P48067 706 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 F2RL1P55085 397 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 IAH1Q2TAA2 248 aaPredicted RBP11.03□□□□□ -0.64
CAPN1-208ENST00000527323 C16orf54Q6UWD8 224 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 C5orf46Q6UWT4 87 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 Q6ZRG5 221 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 SLC16A13Q7RTY0 426 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 PEG10Q86TG7 708 aaKnown RBP11.03□□□□□ -0.64
CAPN1-208ENST00000527323 OR1N1Q8NGS0 311 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 KIRREL1Q96J84 757 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 CLCC1Q96S66 551 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 SRPK3Q9UPE1 567 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 ATMQ13315 3056 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 IGHV1OR21-1A0A087WYE8 117 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 IGKV3D-11A0A0A0MRZ8 115 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 TLCD2A6NGC4 264 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 COLCA2A8K830 154 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 ZNF878C9JN71 531 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 LINC01387J3KSC0 135 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 K7EPK0 472 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 MASP2O00187 686 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 TIAF1O95411 115 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 HEXAP06865 529 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 FBLP22087 321 aaKnown RBP11.03□□□□□ -0.64
CAPN1-208ENST00000527323 LAP3P28838 519 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 RBMXP38159 391 aaKnown RBP11.03□□□□□ -0.64
CAPN1-208ENST00000527323 CLRN1P58418 232 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 CCL7P80098 99 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 CHRFAM7AQ494W8 412 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 OR2A2Q6IF42 318 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 ZNF574Q6ZN55 896 aaPredicted RBP11.03□□□□□ -0.64
CAPN1-208ENST00000527323 FAM71E2Q8N5Q1 922 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 OR10S1Q8NGN2 331 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 MFSD8Q8NHS3 518 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 DNAJB11Q9UBS4 358 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 C14orf166Q9Y224 244 aaKnown RBP11.03□□□□□ -0.64
CAPN1-208ENST00000527323 PIEZO2Q9H5I5 2752 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 A0A1W2PQM1 296 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 C9JQL5 133 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 SNRNP70P08621 437 aaKnown RBP11.03□□□□□ -0.64
CAPN1-208ENST00000527323 RPL12P30050 165 aaKnown RBP11.03□□□□□ -0.64
CAPN1-208ENST00000527323 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.03□□□□□ -0.64
CAPN1-208ENST00000527323 DHRS11Q6UWP2 260 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 LANCL3Q6ZV70 420 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 SECTM1Q8WVN6 248 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 OR10A2Q9H208 303 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 ZNF304Q9HCX3 659 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 ZNF701Q9NV72 531 aaPredicted RBP11.03□□□□□ -0.64
CAPN1-208ENST00000527323 B3GALT5Q9Y2C3 310 aa11.03□□□□□ -0.64
CAPN1-208ENST00000527323 LSM5Q9Y4Y9 91 aaKnown RBP11.03□□□□□ -0.64
CAPN1-208ENST00000527323 ZNF318Q5VUA4 2279 aa11.02□□□□□ -0.64
CAPN1-208ENST00000527323 M0R036 132 aa11.02□□□□□ -0.65
CAPN1-208ENST00000527323 TAAR5O14804 337 aa11.02□□□□□ -0.65
CAPN1-208ENST00000527323 TO15178 435 aa11.02□□□□□ -0.65
CAPN1-208ENST00000527323 ACAA1P09110 424 aaPredicted RBP11.02□□□□□ -0.65
CAPN1-208ENST00000527323 HOXB1P14653 301 aaPredicted RBP11.02□□□□□ -0.65
CAPN1-208ENST00000527323 BLVRBP30043 206 aaPredicted RBP11.02□□□□□ -0.65
CAPN1-208ENST00000527323 P2RY4P51582 365 aa11.02□□□□□ -0.65
CAPN1-208ENST00000527323 EFNA3P52797 238 aa11.02□□□□□ -0.65
CAPN1-208ENST00000527323 ZNF121P58317 390 aaPredicted RBP11.02□□□□□ -0.65
CAPN1-208ENST00000527323 ZP4Q12836 540 aa11.02□□□□□ -0.65
CAPN1-208ENST00000527323 MISPQ8IVT2 679 aa11.02□□□□□ -0.65
CAPN1-208ENST00000527323 OR5AS1Q8N127 324 aa11.02□□□□□ -0.65
CAPN1-208ENST00000527323 ZNF283Q8N7M2 679 aa11.02□□□□□ -0.65
CAPN1-208ENST00000527323 POC1AQ8NBT0 407 aa11.02□□□□□ -0.65
CAPN1-208ENST00000527323 DDIT4LQ96D03 193 aa11.02□□□□□ -0.65
CAPN1-208ENST00000527323 RTTNQ86VV8 2226 aa11.02□□□□□ -0.65
CAPN1-208ENST00000527323 VSTM2BA6NLU5 285 aa11.02□□□□□ -0.65
CAPN1-208ENST00000527323 PTAFRP25105 342 aa11.02□□□□□ -0.65
CAPN1-208ENST00000527323 FCGR2CP31995 323 aa11.02□□□□□ -0.65
CAPN1-208ENST00000527323 HABP2Q14520 560 aaPredicted RBP11.02□□□□□ -0.65
CAPN1-208ENST00000527323 KRBOX4Q5JUW0 171 aa11.02□□□□□ -0.65
CAPN1-208ENST00000527323 FAM57BQ71RH2 274 aa11.02□□□□□ -0.65
CAPN1-208ENST00000527323 ZDHHC12Q96GR4 267 aa11.02□□□□□ -0.65
CAPN1-208ENST00000527323 NUDT16L1Q9BRJ7 211 aaKnown RBP11.02□□□□□ -0.65
CAPN1-208ENST00000527323 FBLN5Q9UBX5 448 aa11.02□□□□□ -0.65
CAPN1-208ENST00000527323 TSPAN15O95858 294 aa11.01□□□□□ -0.65
CAPN1-208ENST00000527323 OR8U9P0C7N5 309 aa11.01□□□□□ -0.65
CAPN1-208ENST00000527323 SP9P0CG40 484 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms