RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 SLC16A11Q8NCK7 471 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 FLYWCH2Q96CP2 140 aaKnown RBP12.35□□□□□ -0.43
LRRK1-202ENST00000525284 PBOV1Q9GZY1 135 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 LTB4R2Q9NPC1 389 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 TREX1Q9NSU2 369 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 B3GALT4O96024 378 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 STAC2Q6ZMT1 411 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 OR1B1Q8NGR6 318 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.35□□□□□ -0.43
LRRK1-202ENST00000525284 GRAMD2BQ96HH9 432 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 Q9N2K0 584 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 HINT3Q9NQE9 182 aaKnown RBP12.35□□□□□ -0.43
LRRK1-202ENST00000525284 EXOGQ9Y2C4 368 aaKnown RBP12.35□□□□□ -0.43
LRRK1-202ENST00000525284 ADAM20O43506 726 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 APOBEC1P41238 236 aaKnown RBP12.35□□□□□ -0.43
LRRK1-202ENST00000525284 LIMK1P53667 647 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 GP2P55259 537 aaKnown RBP12.35□□□□□ -0.43
LRRK1-202ENST00000525284 ZNF252P-AS1Q0IIN9 211 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 LINC00303Q3SY05 128 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 COL1A1P02452 1464 aaPredicted RBP12.35□□□□□ -0.43
LRRK1-202ENST00000525284 MYH6P13533 1939 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 IFITM5A6NNB3 132 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 ST8SIA5O15466 376 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 SPNP16150 400 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 POU3F3P20264 500 aaPredicted RBP12.35□□□□□ -0.43
LRRK1-202ENST00000525284 SRP14P37108 136 aaKnown RBP12.35□□□□□ -0.43
LRRK1-202ENST00000525284 LBX1P52954 281 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 ANKLE1Q8NAG6 615 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 MMP17Q9ULZ9 603 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 PROCRQ9UNN8 238 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 KDM3BQ7LBC6 1761 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 MEX3AA1L020 520 aaKnown RBP12.35□□□□□ -0.43
LRRK1-202ENST00000525284 PYCARD-AS1I3L0S3 204 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 SLC35E2P0CK97 266 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 GZMKP49863 264 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 MRPL54Q6P161 138 aaKnown RBP12.35□□□□□ -0.43
LRRK1-202ENST00000525284 OR5C1Q8NGR4 320 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 OR1L1Q8NH94 360 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 CST4P01036 141 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 HLA-BQ31612 363 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 ZNF738Q8NE65 137 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 OR8D4Q8NGM9 314 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 PELI1Q96FA3 418 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 PRRX2Q99811 253 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 MED1Q15648 1581 aaPredicted RBP12.34□□□□□ -0.43
LRRK1-202ENST00000525284 ZNF26P17031 533 aaPredicted RBP12.34□□□□□ -0.43
LRRK1-202ENST00000525284 SPATA46Q5T0L3 261 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 FCRL6Q6DN72 434 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 ISOC2Q96AB3 205 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 CLDN23Q96B33 292 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 JAM3Q9BX67 310 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 TXNRD2Q9NNW7 524 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 MIOXQ9UGB7 285 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 FCGR3BO75015 233 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 THBS4P35443 961 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 CSNK1EP49674 416 aaKnown RBP12.34□□□□□ -0.43
LRRK1-202ENST00000525284 HLA-DRB3P79483 266 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 SSX8Q7RTT4 187 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 CXorf67Q86X51 503 aaPredicted RBP12.34□□□□□ -0.43
LRRK1-202ENST00000525284 OR2T10Q8NGZ9 312 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 LOC389332A0A1B0GUA5 103 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 FABP5Q01469 135 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 Q5PR19 223 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 OR10G4Q8NGN3 311 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 OR10G9Q8NGN4 311 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 OR10G7Q8NGN6 311 aa12.34□□□□□ -0.43
LRRK1-202ENST00000525284 SLC19A1P41440 591 aa12.33□□□□□ -0.43
LRRK1-202ENST00000525284 EVX1P49640 407 aa12.33□□□□□ -0.43
LRRK1-202ENST00000525284 PDCD1Q15116 288 aa12.33□□□□□ -0.43
LRRK1-202ENST00000525284 OR10A7Q8NGE5 316 aa12.33□□□□□ -0.43
LRRK1-202ENST00000525284 ISL2Q96A47 359 aa12.33□□□□□ -0.43
LRRK1-202ENST00000525284 C20orf27Q9GZN8 174 aa12.33□□□□□ -0.43
LRRK1-202ENST00000525284 POMT2Q9UKY4 750 aa12.33□□□□□ -0.43
LRRK1-202ENST00000525284 IGKV3-7A0A075B6H7 116 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 PRRG2O14669 202 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 SIAH2O43255 324 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 FABP2P12104 132 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 EXT1Q16394 746 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 TMEM128Q5BJH2 165 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 XKR7Q5GH72 579 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 KMT5CQ86Y97 462 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 ZNF740Q8NDX6 193 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 ADPRHL1Q8NDY3 354 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 ZNF519Q8TB69 540 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 ZNF426Q9BUY5 554 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 PARD6GQ9BYG4 376 aaPredicted RBP12.33□□□□□ -0.44
LRRK1-202ENST00000525284 FUT9Q9Y231 359 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 IGHA1P01876 353 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 IGHA2P01877 340 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 GGTA1PQ4G0N0 100 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 TMPRSS13Q9BYE2 586 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 KCPQ6ZWJ8 1503 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 ZNF749O43361 778 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 SPRY3O43610 288 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 IL2RAP01589 272 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 IQCF3P0C7M6 154 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 CCR2P41597 374 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 PKIAP61925 76 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 SLC48A1Q6P1K1 146 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 MS4A8Q9BY19 250 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 189.7 ms