RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 TSTA3Q13630 321 aaPredicted RBP1.12□□□□□ -2.23
CD44-212ENST00000524922 SELPLGQ14242 412 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 GNA13Q14344 377 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 QPRTQ15274 297 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 ZMYND11Q15326 602 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 TRADDQ15628 312 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 TBC1D28Q2M2D7 210 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 LRRC75BQ2VPJ9 315 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 SLC36A2Q495M3 483 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 TRMT12Q53H54 448 aaKnown RBP1.12□□□□□ -2.23
CD44-212ENST00000524922 TEX35Q5T0J7 233 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 C10orf128Q5T292 105 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 ATAD3CQ5T2N8 411 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 LINC00242Q5T6M2 205 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 TSPO2Q5TGU0 170 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 IL23RQ5VWK5 629 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 TEX36Q5VZQ5 186 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 WDR25Q64LD2 544 aaPredicted RBP1.12□□□□□ -2.23
CD44-212ENST00000524922 GPR139Q6DWJ6 353 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 ANKRD26P1Q6NSI1 321 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 CASP12Q6UXS9 341 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 APOOLQ6UXV4 268 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 FBXW12Q6X9E4 464 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 ZBTB49Q6ZSB9 765 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 EIF3MQ7L2H7 374 aaKnown RBP1.12□□□□□ -2.23
CD44-212ENST00000524922 KRT74Q7RTS7 529 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 COMMD6Q7Z4G1 85 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 MARCH3Q86UD3 253 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 CTAGE6Q86UF2 777 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 VSTM4Q8IW00 320 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 C20orf196Q8IYI0 205 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 TMEM123Q8N131 208 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 ZNF619Q8N2I2 560 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 OSR2Q8N2R0 312 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 ZIC4Q8N9L1 334 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 POC5Q8NA72 575 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 OR52E4Q8NGH9 312 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 OR52H1Q8NGJ2 320 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 OR2K2Q8NGT1 345 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 OR9A2Q8NGT5 310 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 OR5K1Q8NHB7 308 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 MFSD8Q8NHS3 518 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 CLHC1Q8NHS4 586 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 SFXN5Q8TD22 340 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 MYOZ3Q8TDC0 251 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 TNFRSF14Q92956 283 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 EXT2Q93063 718 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 CREB3L1Q96BA8 519 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 TM4SF18Q96CE8 201 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 C16orf58Q96GQ5 468 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 ZNF607Q96SK3 696 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 CCT7Q99832 543 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 CHID1Q9BWS9 393 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 RHOJQ9H4E5 214 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 ZNF702PQ9H963 129 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 MEAF6Q9HAF1 191 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 ELOVL3Q9HB03 270 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 NMRAL1Q9HBL8 299 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 IL1RAPQ9NPH3 570 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 KRT84Q9NSB2 600 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 DDX18Q9NVP1 670 aaKnown RBP1.12□□□□□ -2.23
CD44-212ENST00000524922 THUMPD1Q9NXG2 353 aaKnown RBP1.12□□□□□ -2.23
CD44-212ENST00000524922 SENP1Q9P0U3 644 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 ABCD2Q9UBJ2 740 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 OPTCQ9UBM4 332 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 BCAP29Q9UHQ4 241 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 BAIAP2L1Q9UHR4 511 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 MRM2Q9UI43 246 aaKnown RBP1.12□□□□□ -2.23
CD44-212ENST00000524922 ELF5Q9UKW6 265 aaPredicted RBP1.12□□□□□ -2.23
CD44-212ENST00000524922 SNX6Q9UNH7 406 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 KLK5Q9Y337 293 aaPredicted RBP1.12□□□□□ -2.23
CD44-212ENST00000524922 CACNG2Q9Y698 323 aa1.12□□□□□ -2.23
CD44-212ENST00000524922 TMED7-TICAM2A0A0A6YYA0 188 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 TRAV38-1A0A0B4J264 116 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 A0A0U1RQK1 487 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 hCG_1809904A0A1W2PP81 198 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 A0A1W2PPE2 198 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 A0A1W2PQ09 198 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 A0A1W2PR64 198 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 A0A1W2PRV1 198 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 KRT87PA6NCN2 255 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 TMCO5BA8MYB1 307 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 E7ESA3 106 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 PTGES3LE9PB15 166 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 F8VVB4 439 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 F8VWA3 439 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 SLC1A7O00341 560 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 RTCAO00442 366 aaKnown RBP1.11□□□□□ -2.23
CD44-212ENST00000524922 MANBAO00462 879 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 CTDSP2O14595 271 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 AIM2O14862 343 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 NPFFO15130 113 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 PGRMC2O15173 223 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 FGF16O43320 207 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 SCO2O43819 266 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 AHCYL1O43865 530 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 BCAS1O75363 584 aaPredicted RBP1.11□□□□□ -2.23
CD44-212ENST00000524922 LYPLA1O75608 230 aaPredicted RBP1.11□□□□□ -2.23
CD44-212ENST00000524922 GLCEO94923 617 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 LRATO95237 230 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms