RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 RAC2P15153 192 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 MGMTP16455 207 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 PSMB1P20618 241 aaKnown RBP8.63□□□□□ -1.03
VPS13B-212ENST00000524330 SERPINA2P20848 420 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 ACKR3P25106 362 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 GIFP27352 417 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 CEACAM8P31997 349 aaPredicted RBP8.63□□□□□ -1.03
VPS13B-212ENST00000524330 SRP9P49458 86 aaKnown RBP8.63□□□□□ -1.03
VPS13B-212ENST00000524330 PPP1CBP62140 327 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 QRFPP83859 136 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 HGFACQ04756 655 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 KLRB1Q12918 225 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 PRDX4Q13162 271 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 CEACAM21Q3KPI0 293 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 PLA1AQ53H76 456 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 TIMM23BQ5SRD1 257 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 ZNF324BQ6AW86 544 aaPredicted RBP8.63□□□□□ -1.03
VPS13B-212ENST00000524330 OR10K2Q6IF99 312 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 STEAP1BQ6NZ63 245 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 ZNF573Q86YE8 665 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 CISD2Q8N5K1 135 aaKnown RBP8.63□□□□□ -1.03
VPS13B-212ENST00000524330 CELF2-AS1Q8N7Q2 184 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 ZNF610Q8N9Z0 462 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 UBASH3BQ8TF42 649 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 AQP3Q92482 292 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 DACT3Q96B18 629 aaPredicted RBP8.63□□□□□ -1.03
VPS13B-212ENST00000524330 SPACA5Q96QH8 159 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 GAL3ST1Q99999 423 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 TM2D1Q9BX74 207 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 SELENOIQ9C0D9 397 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 LPAR5Q9H1C0 372 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 PLK3Q9H4B4 646 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 RHOFQ9HBH0 211 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 ZNF71Q9NQZ8 489 aaPredicted RBP8.63□□□□□ -1.03
VPS13B-212ENST00000524330 ETAA1Q9NY74 926 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 MYEF2Q9P2K5 600 aaKnown RBP8.63□□□□□ -1.03
VPS13B-212ENST00000524330 STARD10Q9Y365 291 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 RHBDD3Q9Y3P4 386 aa8.63□□□□□ -1.03
VPS13B-212ENST00000524330 TMEM8BA6NDV4 472 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 FAM90A10PA6NDY2 464 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 FAM90A18PA6NE21 464 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 FAM90A16PA6NEW6 464 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 FAM90A20PA6NIJ5 464 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 FAM90A8PA6NJQ4 464 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 FAM90A7PA6NKC0 464 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 OR5H1A6NKK0 313 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 FAM90A22PA8MWA6 464 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 FAM90A12PA8MX19 464 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 FAM90A5PA8MXJ8 464 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 FAM90A23PA8MXZ1 464 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 RAB27BO00194 218 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 TNFSF13O75888 250 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 CCNKO75909 580 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 RAB3DO95716 219 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 MT-ND4P03905 459 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 IFNA6P05013 189 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 FAM90A15PP0C7V4 464 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 FAM90A13PP0C7W8 464 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 FAM90A14PP0C7W9 464 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 FAM90A24PP0C7X0 464 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 HIST1H1DP16402 221 aaKnown RBP8.62□□□□□ -1.03
VPS13B-212ENST00000524330 ZNF14P17017 642 aaPredicted RBP8.62□□□□□ -1.03
VPS13B-212ENST00000524330 GCH1P30793 250 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 GNG3P63215 75 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 PDZK1IP1Q13113 114 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 UNC119Q13432 240 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 RBMS2Q15434 407 aaKnown RBP8.62□□□□□ -1.03
VPS13B-212ENST00000524330 TATDN3Q17R31 274 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 ZNF260Q3ZCT1 412 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 RNASE10Q5GAN6 216 aaKnown RBP8.62□□□□□ -1.03
VPS13B-212ENST00000524330 FBXW12Q6X9E4 464 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 ASCL4Q6XD76 172 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 C3P1Q6ZMU1 363 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 TRAPPC6BQ86SZ2 158 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 TMEM17Q86X19 198 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 CXorf67Q86X51 503 aaPredicted RBP8.62□□□□□ -1.03
VPS13B-212ENST00000524330 PAQR4Q8N4S7 273 aaPredicted RBP8.62□□□□□ -1.03
VPS13B-212ENST00000524330 FAM89BQ8N5H3 189 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 SPERTQ8NA61 448 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 OR8S1Q8NH09 359 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 CCDC107Q8WV48 283 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 HPS1Q92902 700 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 SEH1LQ96EE3 360 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 SCGB3A2Q96PL1 93 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 PRRT1Q99946 306 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 SLC25A21Q9BQT8 299 aaPredicted RBP8.62□□□□□ -1.03
VPS13B-212ENST00000524330 RTL8AQ9BWD3 113 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 OPN3Q9H1Y3 402 aaPredicted RBP8.62□□□□□ -1.03
VPS13B-212ENST00000524330 NOX3Q9HBY0 568 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.62□□□□□ -1.03
VPS13B-212ENST00000524330 ING3Q9NXR8 418 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 ELOVL5Q9NYP7 299 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 MRPL15Q9P015 296 aaKnown RBP8.62□□□□□ -1.03
VPS13B-212ENST00000524330 LUZP4Q9P127 313 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 KLK11Q9UBX7 282 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 ZNF629Q9UEG4 869 aaPredicted RBP8.62□□□□□ -1.03
VPS13B-212ENST00000524330 ZNF221Q9UK13 617 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 RAXQ9Y2V3 346 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 ZNF292O60281 2723 aa8.62□□□□□ -1.03
VPS13B-212ENST00000524330 MUC3AQ02505 3323 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms