RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 CMC1Q7Z7K0 106 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 ZNF567Q8N184 647 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 LRRC52Q8N7C0 313 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 Q8N9W7 124 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 NPBQ8NG41 125 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 OR10R2Q8NGX6 335 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 NTAN1Q96AB6 310 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 C12orf43Q96C57 262 aaKnown RBP3.96□□□□□ -1.78
SKP1-213ENST00000524288 LRRC58Q96CX6 371 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 VAT1Q99536 393 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 KIFC1Q9BW19 673 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 SHCBP1LQ9BZQ2 653 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 INIPQ9NRY2 104 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 AGPAT4Q9NRZ5 378 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 HRASLS2Q9NWW9 162 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 LYARQ9NX58 379 aaKnown RBP3.96□□□□□ -1.78
SKP1-213ENST00000524288 AHSPQ9NZD4 102 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 PAIP2BQ9ULR5 123 aaKnown RBP3.96□□□□□ -1.78
SKP1-213ENST00000524288 TP53TG5Q9Y2B4 290 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 PRG3Q9Y2Y8 225 aaPredicted RBP3.96□□□□□ -1.78
SKP1-213ENST00000524288 HEY1Q9Y5J3 304 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 MRPS18BQ9Y676 258 aaKnown RBP3.96□□□□□ -1.78
SKP1-213ENST00000524288 COL1A2P08123 1366 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 NRCAMQ92823 1304 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 LOC100653049A0A140TA62 436 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 A0A1B0GW55 424 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 FUOMA2VDF0 154 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 PRORSD1PA6NEY8 169 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 CCDC160A6NGH7 325 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 FXYD1O00168 92 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 PSMD12O00232 456 aaPredicted RBP3.95□□□□□ -1.78
SKP1-213ENST00000524288 KMOO15229 486 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 SLC31A2O15432 143 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 KRT34O76011 436 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 DUX4L2P0CJ85 424 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 DUX4L3P0CJ86 424 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 DUX4L4P0CJ87 422 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 DUX4L5P0CJ88 424 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 DUX4L6P0CJ89 424 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 DUX4L7P0CJ90 424 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 TDGF1P13385 188 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 ZNF30P17039 623 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 STOMP27105 288 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 BCAP31P51572 246 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 TDGF1P3P51864 188 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 GABARAPL2P60520 117 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 ESRRGP62508 458 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 ADARB1P78563 741 aaKnown RBP3.95□□□□□ -1.78
SKP1-213ENST00000524288 IRF8Q02556 426 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 SMARCB1Q12824 385 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 ART3Q13508 389 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 ZNF773Q6PK81 442 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 DUX4L9Q6RFH8 374 aaPredicted RBP3.95□□□□□ -1.78
SKP1-213ENST00000524288 SCD5Q86SK9 330 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 TRIML2Q8N7C3 387 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 TSEN15Q8WW01 171 aaKnown RBP3.95□□□□□ -1.78
SKP1-213ENST00000524288 PEX13Q92968 403 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 TMIGD2Q96BF3 282 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 L3HYPDHQ96EM0 354 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 BTN2A3PQ96KV6 586 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 RDH12Q96NR8 316 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 PPP1R2P1Q96PQ5 205 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 P2RX4Q99571 388 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 MRPL57Q9BQC6 102 aaKnown RBP3.95□□□□□ -1.78
SKP1-213ENST00000524288 C9orf16Q9BUW7 83 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 DHX35Q9H5Z1 703 aaKnown RBP3.95□□□□□ -1.78
SKP1-213ENST00000524288 WDR55Q9H6Y2 383 aaPredicted RBP3.95□□□□□ -1.78
SKP1-213ENST00000524288 AUNIPQ9H7T9 357 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 RPRD1BQ9NQG5 326 aaKnown RBP3.95□□□□□ -1.78
SKP1-213ENST00000524288 C20orf96Q9NUD7 363 aaPredicted RBP3.95□□□□□ -1.78
SKP1-213ENST00000524288 RPS6KB2Q9UBS0 482 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 DUX4Q9UBX2 424 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 CELA1Q9UNI1 258 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 FADS3Q9Y5Q0 445 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 KIAA1671Q9BY89 1806 aa3.95□□□□□ -1.78
SKP1-213ENST00000524288 PLXNA4Q9HCM2 1894 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 MICAL3Q7RTP6 2002 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 GOLGA8TH3BQL2 631 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 BOLA2-SMG1P6H3BVE0 249 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 NME4O00746 187 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 MRASO14807 208 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 MRPS12O15235 138 aaKnown RBP3.94□□□□□ -1.78
SKP1-213ENST00000524288 ACOX3O15254 700 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 B4GALT5O43286 388 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 AKR7A2O43488 359 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 HUS1O60921 280 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 SUPT3HO75486 399 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 CNMDO75829 334 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 STAG3L3P0CL85 134 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 IGHV3-43DP0DP04 118 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 GFAPP14136 432 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 CRISP2P16562 243 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 GSTM3P21266 225 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 MAS1LP35410 378 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 SLC1A2P43004 574 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 RPS10P46783 165 aaKnown RBP3.94□□□□□ -1.78
SKP1-213ENST00000524288 CX3CR1P49238 355 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 NAA20P61599 178 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 CRADDP78560 199 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms