RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 ATPAF1Q5TC12 328 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC9-215ENST00000524162 LPCAT4Q643R3 524 aa17.41■□□□□ 0.38
TRAPPC9-215ENST00000524162 USP43Q70EL4 1123 aa17.41■□□□□ 0.38
TRAPPC9-215ENST00000524162 FAM90A1Q86YD7 464 aa17.41■□□□□ 0.38
TRAPPC9-215ENST00000524162 SCCPDHQ8NBX0 429 aa17.41■□□□□ 0.38
TRAPPC9-215ENST00000524162 OR14K1Q8NGZ2 314 aa17.41■□□□□ 0.38
TRAPPC9-215ENST00000524162 LRRC29Q8WV35 223 aa17.41■□□□□ 0.38
TRAPPC9-215ENST00000524162 TMEM158Q8WZ71 300 aa17.41■□□□□ 0.38
TRAPPC9-215ENST00000524162 FAM71F1Q96KD3 344 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC9-215ENST00000524162 METTL17Q9H7H0 456 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC9-215ENST00000524162 ERVK-18Q9QC07 812 aa17.41■□□□□ 0.38
TRAPPC9-215ENST00000524162 IGHV2-70DA0A0C4DH43 119 aa17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 GPR37O15354 613 aa17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 PHF1O43189 567 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 NRASP01111 189 aa17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 LIPFP07098 398 aa17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 RPSAP08865 295 aaKnown RBP17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 UBCP0CG48 685 aaKnown RBP17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 ACTA2P62736 377 aa17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 ACTG2P63267 376 aa17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 CSNK2BP67870 215 aa17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 RAB40BQ12829 278 aa17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 CLVS2Q5SYC1 327 aa17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 LYPD2Q6UXB3 125 aa17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 BTNL3Q6UXE8 466 aa17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 ZNF555Q8NEP9 628 aa17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 PPP1R14AQ96A00 147 aa17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 TECTBQ96PL2 329 aa17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 MRI1Q9BV20 369 aa17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 FGF23Q9GZV9 251 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 OR51I2Q9H344 312 aa17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 GTF2A1LQ9UNN4 478 aa17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 AUP1Q9Y679 476 aa17.4■□□□□ 0.38
TRAPPC9-215ENST00000524162 LOC105371242A0A075B767 164 aa17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 C3orf80F5H4A9 247 aa17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 TCF21O43680 179 aa17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 APOL3O95236 402 aa17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 FADS2O95864 444 aaKnown RBP17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 ECDO95905 644 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 IGHA1P01876 353 aa17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 ISG15P05161 165 aa17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 DBTP11182 482 aaKnown RBP17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 FAHP16930 419 aa17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 CD80P33681 288 aa17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 CCR9P51686 369 aa17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 ZNF91Q05481 1191 aa17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 GABPB1Q06547 395 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 TUSC1Q2TAM9 212 aa17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 SFRP4Q6FHJ7 346 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 ZNF771Q7L3S4 317 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 SYS1Q8N2H4 156 aa17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 SPATA3Q8NHX4 192 aa17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 ZNF671Q8TAW3 534 aa17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 HAVCR2Q8TDQ0 301 aa17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 RNF166Q96A37 237 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 LGALS12Q96DT0 336 aa17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 MDFIQ99750 246 aa17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 RPL36Q9Y3U8 105 aaKnown RBP17.39■□□□□ 0.37
TRAPPC9-215ENST00000524162 DAPL1A0PJW8 107 aa17.38■□□□□ 0.37
TRAPPC9-215ENST00000524162 CASQ2O14958 399 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC9-215ENST00000524162 ADAM20O43506 726 aa17.38■□□□□ 0.37
TRAPPC9-215ENST00000524162 ENSAO43768 121 aaKnown RBP17.38■□□□□ 0.37
TRAPPC9-215ENST00000524162 RPP14O95059 124 aaKnown RBP17.38■□□□□ 0.37
TRAPPC9-215ENST00000524162 ACAA1P09110 424 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC9-215ENST00000524162 EGR1P18146 543 aa17.38■□□□□ 0.37
TRAPPC9-215ENST00000524162 GPM6AP51674 278 aa17.38■□□□□ 0.37
TRAPPC9-215ENST00000524162 MRPL28Q13084 256 aaKnown RBP17.38■□□□□ 0.37
TRAPPC9-215ENST00000524162 TTC23Q5W5X9 447 aa17.38■□□□□ 0.37
TRAPPC9-215ENST00000524162 JAM3Q9BX67 310 aa17.38■□□□□ 0.37
TRAPPC9-215ENST00000524162 CTSZQ9UBR2 303 aa17.38■□□□□ 0.37
TRAPPC9-215ENST00000524162 GNG8Q9UK08 70 aa17.38■□□□□ 0.37
TRAPPC9-215ENST00000524162 A0A1B0GVI7 797 aa17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 ZNF732B4DXR9 585 aa17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 P2RY10O00398 339 aa17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 EPHA1P21709 976 aa17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 GALEQ14376 348 aa17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 RCN1Q15293 331 aa17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 KLHL22Q53GT1 634 aa17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 WDR38Q5JTN6 314 aa17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 TMEM244Q5VVB8 128 aa17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 PLCXD3Q63HM9 321 aa17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 STUMQ69YW2 141 aa17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 KCTD8Q6ZWB6 473 aa17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 SLC36A1Q7Z2H8 476 aa17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 ZNF573Q86YE8 665 aa17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 PRSS35Q8N3Z0 413 aa17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 BOLLQ8N9W6 283 aaKnown RBP17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 C19orf18Q8NEA5 215 aa17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 OR2G2Q8NGZ5 317 aa17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 ZFAND2BQ8WV99 257 aa17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 RPL3LQ92901 407 aaKnown RBP17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 UPRTQ96BW1 309 aa17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 ACOXLQ9NUZ1 547 aa17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 RASL12Q9NYN1 266 aa17.37■□□□□ 0.37
TRAPPC9-215ENST00000524162 SYT7O43581 403 aa17.36■□□□□ 0.37
TRAPPC9-215ENST00000524162 NOS1APO75052 506 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC9-215ENST00000524162 GYPAP02724 150 aa17.36■□□□□ 0.37
TRAPPC9-215ENST00000524162 TGM4P49221 684 aa17.36■□□□□ 0.37
TRAPPC9-215ENST00000524162 IL18R1Q13478 541 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms