RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 OR5AR1Q8NGP9 310 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 NEK7Q8TDX7 302 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 SMARCD2Q92925 531 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 TVP23CQ96ET8 276 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 TSSK2Q96PF2 358 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 CREBZFQ9NS37 354 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 LNP1A1A4G5 178 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 LIPT2A6NK58 231 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 H7C4K7 107 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 PEX12O00623 359 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 C1QL1O75973 258 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 AMBPP02760 352 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 RPS27P42677 84 aaKnown RBP7.42□□□□□ -1.22
CSMD1-213ENST00000523488 OR3A1P47881 315 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 FHITP49789 147 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 ERVFC1-1P60608 527 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 ZPLD1Q8TCW7 415 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 PARD6GQ9BYG4 376 aaPredicted RBP7.42□□□□□ -1.22
CSMD1-213ENST00000523488 OR8D2Q9GZM6 311 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 RAB22AQ9UL26 194 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 MRPS18BQ9Y676 258 aaKnown RBP7.42□□□□□ -1.22
CSMD1-213ENST00000523488 A0A1B0GWA3 101 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 A6NNC1 897 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 HCRTR2O43614 444 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 CD70P32970 193 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 FOXK1P85037 733 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 UNC119Q13432 240 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 IQCJQ1A5X6 159 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 NCR3LG1Q68D85 454 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 POMZP3Q6PJE2 187 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 DPY19L4Q7Z388 723 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 CSNK1A1LQ8N752 337 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 OR10C1Q96KK4 312 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 KIAA1456Q9P272 454 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 DKKL1Q9UK85 242 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 TOMM40O96008 361 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 PNLIPP16233 465 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 HNF1AP20823 631 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 GPR3P46089 330 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 GPR1P46091 355 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 ARSJQ5FYB0 599 aaPredicted RBP7.41□□□□□ -1.22
CSMD1-213ENST00000523488 CNKSR3Q6P9H4 555 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 ADAMTSL4Q6UY14 1074 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 TMEM182Q6ZP80 229 aaPredicted RBP7.41□□□□□ -1.22
CSMD1-213ENST00000523488 APCDD1LQ8NCL9 501 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 OR2L8Q8NGY9 312 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 FNDC9Q8TBE3 224 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 SLC25A44Q96H78 314 aaPredicted RBP7.41□□□□□ -1.22
CSMD1-213ENST00000523488 OR8B4Q96RC9 309 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 WFDC1Q9HC57 220 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 ZNF346Q9UL40 294 aaKnown RBP7.41□□□□□ -1.22
CSMD1-213ENST00000523488 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.41□□□□□ -1.22
CSMD1-213ENST00000523488 MEGF11A6BM72 1044 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 PPP5D1E7EU14 171 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 SIAH2O43255 324 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 MDKP21741 143 aaPredicted RBP7.41□□□□□ -1.22
CSMD1-213ENST00000523488 IDH3GP51553 393 aaPredicted RBP7.41□□□□□ -1.22
CSMD1-213ENST00000523488 PAX5Q02548 391 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 TLE4Q04727 773 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 OR5I1Q13606 314 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 CLEC18BQ6UXF7 455 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 LINC01555Q8NAE3 123 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 MFSD9Q8NBP5 474 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 VN1R2Q8NFZ6 395 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 GAL3ST2Q9H3Q3 398 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 IGFLR1Q9H665 355 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 WDR76Q9H967 626 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 MYOTQ9UBF9 498 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 TMEM14AQ9Y6G1 99 aa7.41□□□□□ -1.22
CSMD1-213ENST00000523488 A0A1B0GU03 582 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 NPIPB13A6NJU9 1138 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 CDRT15L2A8MXV6 281 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 ZNF732B4DXR9 585 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 GPR89AB7ZAQ6 455 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 NPIPB4C9JG80 1138 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 IGLV3-1P01715 115 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 GSTP1P09211 210 aaKnown RBP7.4□□□□□ -1.22
CSMD1-213ENST00000523488 GPR89BP0CG08 455 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 GRK6P43250 576 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 MMP16P51512 607 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 PRPS1P60891 318 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 PNRC1Q12796 327 aaPredicted RBP7.4□□□□□ -1.22
CSMD1-213ENST00000523488 ICAM4Q14773 271 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 HERPUD1Q15011 391 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 RNF151Q2KHN1 245 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 MORN2Q502X0 79 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 SSX7Q7RTT5 188 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 P4HA3Q7Z4N8 544 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 AMZ2Q86W34 360 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 FLVCR1-AS1Q8TAF5 88 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 HAS2Q92819 552 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 TMEM18Q96B42 140 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 CMBLQ96DG6 245 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 WFIKKN1Q96NZ8 548 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 PRRX2Q99811 253 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 RARRES2Q99969 163 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 ZPBPQ9BS86 351 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 CTDSP1Q9GZU7 261 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 CEP192Q8TEP8 1941 aa7.4□□□□□ -1.22
CSMD1-213ENST00000523488 FTCDNL1E5RQL4 147 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms