RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 GPR132Q9UNW8 380 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 TRAPPC6AO75865 159 aa9.4□□□□□ -0.91
RAB11FIP1-204ENST00000522774 HTR3BO95264 441 aa9.4□□□□□ -0.91
RAB11FIP1-204ENST00000522774 IGHEP01854 428 aa9.4□□□□□ -0.91
RAB11FIP1-204ENST00000522774 GP1BAP07359 652 aa9.4□□□□□ -0.91
RAB11FIP1-204ENST00000522774 HOXD11P31277 338 aaPredicted RBP9.4□□□□□ -0.91
RAB11FIP1-204ENST00000522774 C6orf15Q6UXA7 325 aaPredicted RBP9.4□□□□□ -0.91
RAB11FIP1-204ENST00000522774 KCNRGQ8N5I3 272 aa9.4□□□□□ -0.91
RAB11FIP1-204ENST00000522774 OR5H2Q8NGV7 314 aa9.4□□□□□ -0.91
RAB11FIP1-204ENST00000522774 OR10D3Q8NH80 312 aa9.4□□□□□ -0.91
RAB11FIP1-204ENST00000522774 OR1S1Q8NH92 325 aa9.4□□□□□ -0.91
RAB11FIP1-204ENST00000522774 AKR7LQ8NHP1 331 aa9.4□□□□□ -0.91
RAB11FIP1-204ENST00000522774 RHBDD1Q8TEB9 315 aa9.4□□□□□ -0.91
RAB11FIP1-204ENST00000522774 ST8SIA2Q92186 375 aa9.4□□□□□ -0.91
RAB11FIP1-204ENST00000522774 LINC00052Q96N35 136 aa9.4□□□□□ -0.91
RAB11FIP1-204ENST00000522774 VRK1Q99986 396 aaPredicted RBP9.4□□□□□ -0.91
RAB11FIP1-204ENST00000522774 COQ3Q9NZJ6 369 aa9.4□□□□□ -0.91
RAB11FIP1-204ENST00000522774 DBX1A6NMT0 343 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 DLSTP36957 453 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 SNU13P55769 128 aaKnown RBP9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 EIF3IQ13347 325 aaKnown RBP9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 RAB35Q15286 201 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 FAM74A1Q5RGS3 127 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 SLC16A14Q7RTX9 510 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 GPR137CQ8N3F9 429 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 ARRDC1Q8N5I2 433 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 FGFBP3Q8TAT2 258 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 KCNE4Q8WWG9 221 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 TMEM38BQ9NVV0 291 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 GHRLQ9UBU3 117 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 A0A0D9SG52 128 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 DNPH1O43598 174 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 HPP00738 406 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 ZNF32P17041 273 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 SERPINF1P36955 418 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 RGS19P49795 217 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 ACTBL2Q562R1 376 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 H3F3CQ6NXT2 135 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 AAED1Q7RTV5 226 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 C6orf201Q7Z4U5 140 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 CSNK2A3Q8NEV1 391 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 PSMF1Q92530 271 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 ZNF75AQ96N20 296 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 MED9Q9NWA0 146 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 P4HTMQ9NXG6 502 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 ZNF581Q9P0T4 197 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 MBD2Q9UBB5 411 aa9.39□□□□□ -0.91
RAB11FIP1-204ENST00000522774 IGKV1D-8A0A087WSZ0 117 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 C13orf42A0A1B0GVH6 325 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 LGALS8O00214 317 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 ANGPTL7O43827 346 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 MTRF1O75570 445 aaKnown RBP9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 ICAM2P13598 275 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 GABRR1P24046 479 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 LUMP51884 338 aaPredicted RBP9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 SIGLEC14Q08ET2 396 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 RIPPLY1Q0D2K3 151 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 SLC9A3R2Q15599 337 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 TMEM128Q5BJH2 165 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 AADACL3Q5VUY0 350 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 ABLIM2Q6H8Q1 611 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 LHFPL1Q86WI0 220 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 SEMA6DQ8NFY4 1073 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 OR2V1Q8NHB1 315 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 REEP6Q96HR9 211 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 ZNF845Q96IR2 970 aaPredicted RBP9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 S100A13Q99584 98 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 DHRS9Q9BPW9 319 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 RTBDNQ9BSG5 229 aaPredicted RBP9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 TM2D1Q9BX74 207 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 MCTS1Q9ULC4 181 aaKnown RBP9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 IGKV1-27A0A075B6S5 117 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 C5orf51A6NDU8 294 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 CEACAM18A8MTB9 384 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 MSTNO14793 375 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 OR2F2O95006 317 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 PLATP00750 562 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 APOC1P02654 83 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 CST2P09228 141 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 GDF1P27539 372 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 CBX5P45973 191 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 TAS2R31P59538 309 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 UBA52P62987 128 aaKnown RBP9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 SUPT4H1P63272 117 aaKnown RBP9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 OR2F1Q13607 317 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 ZNF345Q14585 488 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 SSPNQ14714 243 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 FAM189A2Q15884 450 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 DRAM2Q6UX65 266 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 PLXDC2Q6UX71 529 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 CLEC18BQ6UXF7 455 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 RAB11FIP2Q7L804 512 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 PEG10Q86TG7 708 aaKnown RBP9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 OR52H1Q8NGJ2 320 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 OR1F12Q8NHA8 337 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 ABHD3Q8WU67 409 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 HDHD3Q9BSH5 251 aaPredicted RBP9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 NUP50Q9UKX7 468 aa9.38□□□□□ -0.91
RAB11FIP1-204ENST00000522774 BCL2L11O43521 198 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms