RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 SYCE1Q8N0S2 351 aa3.29□□□□□ -1.88
CTNNA1-233ENST00000522052 OR4D6Q8NGJ1 314 aa3.29□□□□□ -1.88
CTNNA1-233ENST00000522052 CDKL2Q92772 493 aa3.29□□□□□ -1.88
CTNNA1-233ENST00000522052 PTX4Q96A99 478 aa3.29□□□□□ -1.88
CTNNA1-233ENST00000522052 HSD17B10Q99714 261 aaKnown RBP3.29□□□□□ -1.88
CTNNA1-233ENST00000522052 GABRG3Q99928 467 aa3.29□□□□□ -1.88
CTNNA1-233ENST00000522052 ULBP2Q9BZM5 246 aa3.29□□□□□ -1.88
CTNNA1-233ENST00000522052 OR51B5Q9H339 312 aa3.29□□□□□ -1.88
CTNNA1-233ENST00000522052 TPK1Q9H3S4 243 aa3.29□□□□□ -1.88
CTNNA1-233ENST00000522052 TREM1Q9NP99 234 aa3.29□□□□□ -1.88
CTNNA1-233ENST00000522052 HYOU1Q9Y4L1 999 aa3.29□□□□□ -1.88
CTNNA1-233ENST00000522052 RRBP1Q9P2E9 1410 aaKnown RBP3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 PLCH1Q4KWH8 1693 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 SCN2AQ99250 2005 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 A8MU10 97 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 LINC01619G3V211 115 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 K7EN84 100 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 GATCO43716 136 aaKnown RBP3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 UPK1BO75841 260 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 SC5DO75845 299 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 SMC2O95347 1197 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 MDKP21741 143 aaPredicted RBP3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 TALDO1P37837 337 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 ZNF133P52736 654 aaPredicted RBP3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 RPL23P62829 140 aaKnown RBP3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 SIGLEC14Q08ET2 396 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 IFFO1Q0D2I5 559 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 MAD2L1BPQ15013 274 aaPredicted RBP3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 RBMY1FQ15415 496 aaKnown RBP3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 OR1Q1Q15612 314 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 USF2Q15853 346 aaPredicted RBP3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 TNXAQ16473 311 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 RTL4Q6ZR62 310 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 COPS6Q7L5N1 327 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 C19orf18Q8NEA5 215 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 OR6K2Q8NGY2 324 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 C15orf40Q8WUR7 153 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 CPB2Q96IY4 423 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 FAM19A4Q96LR4 140 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 RDH12Q96NR8 316 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 CAMK2N2Q96S95 79 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 SAMD10Q9BYL1 202 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 TOLLIPQ9H0E2 274 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 ZNF442Q9H7R0 627 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 LHX9Q9NQ69 397 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 ANAPC11Q9NYG5 84 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 CELA1Q9UNI1 258 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 SIGLEC9Q9Y336 463 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 PTPN23Q9H3S7 1636 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 INO80Q9ULG1 1556 aaPredicted RBP3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 FYCO1Q9BQS8 1478 aa3.28□□□□□ -1.88
CTNNA1-233ENST00000522052 TECPR2O15040 1411 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 COL24A1Q17RW2 1714 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 TRAV8-7A0A075B6U6 113 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 IGHV2OR16-5A0A0B4J2B6 119 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 TVP23AA6NH52 213 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 TMX2-CTNND1H3BSU7 103 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 SLC22A5O76082 557 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 LOXP28300 417 aaPredicted RBP3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 SPAM1P38567 509 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 MNAT1P51948 309 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 GFERP55789 205 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 MLF1P58340 268 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 SLC35A1P78382 337 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 C2orf54Q08AI8 447 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 DYNC1I2Q13409 638 aaKnown RBP3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 XRCC4Q13426 336 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 MADCAM1Q13477 382 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 ZNF658BQ4V348 819 aaPredicted RBP3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 TSPO2Q5TGU0 170 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 FBXW9Q5XUX1 488 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 TMEM205Q6UW68 189 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 DEFB123Q8N688 67 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 SULT4A1Q9BR01 284 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 FRMD8P1Q9BZ68 369 aaPredicted RBP3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 ARV1Q9H2C2 271 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 PRO3102Q9H379 93 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 C12orf10Q9HB07 376 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 HMG20AQ9NP66 347 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 VAPAQ9P0L0 249 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 CLEC2DQ9UHP7 191 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 CFL2Q9Y281 166 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 GMEB1Q9Y692 573 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 ZNF646O15015 1829 aaPredicted RBP3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 BDP1A6H8Y1 2624 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 NRAPQ86VF7 1730 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 ZFHX4Q86UP3 3567 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 CASP8AP2Q9UKL3 1982 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 OVOS2A0A0G2JMS6 1433 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 OVOS2A0A0J9YW53 1432 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 ZFYVE9O95405 1425 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 OVOS2Q6IE36 1432 aa3.27□□□□□ -1.89
CTNNA1-233ENST00000522052 PIK3C2BO00750 1634 aa3.26□□□□□ -1.89
CTNNA1-233ENST00000522052 LMTK2Q8IWU2 1503 aa3.26□□□□□ -1.89
CTNNA1-233ENST00000522052 DUOX2Q9NRD8 1548 aa3.26□□□□□ -1.89
CTNNA1-233ENST00000522052 TRAV19A0A0A6YYK7 116 aa3.26□□□□□ -1.89
CTNNA1-233ENST00000522052 MGAT4DA6NG13 374 aa3.26□□□□□ -1.89
CTNNA1-233ENST00000522052 GCM2O75603 506 aaPredicted RBP3.26□□□□□ -1.89
CTNNA1-233ENST00000522052 REM1O75628 298 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms