RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 A0A1W2PPV9 198 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 A8MUA0 341 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 ZNF705EA8MWA4 302 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 PRR23D1E9PI22 279 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 WWP2O00308 870 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 LYPLA1O75608 230 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR2J2O76002 312 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR2F2O95006 317 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 RBMY1CP0DJD4 496 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 PRR23D2P0DMB1 279 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR8G3PP0DMU2 310 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 VDAC1P21796 283 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 HMOX2P30519 316 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 SLC26A3P40879 764 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 FABP6P51161 128 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 GPM6AP51674 278 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 LIM2P55344 173 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 LMO4P61968 165 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 MRPS22P82650 360 aaKnown RBP3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 SLC9A3R2Q15599 337 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 PRR4Q16378 134 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR2B11Q5JQS5 317 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 ZNF658Q5TYW1 1059 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 SAXO2Q658L1 398 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 PDPK2PQ6A1A2 396 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 FRMPD2BQ6IN97 320 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 C16orf87Q6PH81 154 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 REG3GQ6UW15 175 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 ACOT7LQ6ZUV0 252 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 PEX26Q7Z412 305 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 CDKL3Q8IVW4 592 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 KATNAL2Q8IYT4 538 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 C2orf73Q8N5S3 287 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 POM121L12Q8N7R1 296 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 GPR26Q8NDV2 337 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 B3GNT7Q8NFL0 401 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR56B4Q8NH76 319 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 ZNF75CPQ92670 426 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 TSLPQ969D9 159 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 SGK3Q96BR1 496 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 LRRC58Q96CX6 371 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 STARD4Q96DR4 205 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 TECTBQ96PL2 329 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 PANX2Q96RD6 677 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 SH3GL1Q99961 368 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 CHIAQ9BZP6 476 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 DRC3Q9H069 523 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 GBA3Q9H227 469 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 CENPHQ9H3R5 247 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 GNB4Q9HAV0 340 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 MYOZ1Q9NP98 299 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 DHRS4-AS1Q9P1J3 65 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 YARS2Q9Y2Z4 477 aaKnown RBP3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 HEATR1Q9H583 2144 aaKnown RBP3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 ALMS1Q8TCU4 4167 aa3.55□□□□□ -1.84
HMGB1P23-201ENST00000518743 A0A0G2JMP0 313 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 A0A0X1KG70 313 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 MGAT4DA6NG13 374 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 KRTAP29-1A8MX34 341 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 DCTN6O00399 190 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 SAP18O00422 153 aaKnown RBP3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 NDUFAB1O14561 156 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 HSD17B6O14756 317 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 AIM2O14862 343 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR7A10O76100 309 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 RHOXF2BP0C7M4 288 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 CCL3P10147 92 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 IGLL1P15814 213 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 HSPA9P38646 679 aaKnown RBP3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 KIR2DS4P43632 304 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 FBXW4P57775 412 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 GRB7Q14451 532 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 AANATQ16613 207 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 TTC19Q6DKK2 380 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 UQCC3Q6UW78 93 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 TFAP2EQ6VUC0 442 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 SLC25A48Q6ZT89 311 aaKnown RBP3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 GPRIN3Q6ZVF9 776 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 FRA10AC1Q70Z53 315 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 ZNF329Q86UD4 541 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 UMODL1-AS1Q8N2C9 162 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR4M2Q8NGB6 313 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR2L2Q8NH16 312 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 MCOLN3Q8TDD5 553 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 ACMSDQ8TDX5 336 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 PAQR8Q8TEZ7 354 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 NAT14Q8WUY8 206 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 C1orf147Q96MC9 270 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 KCNA7Q96RP8 456 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 BPIFA3Q9BQP9 254 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 RHOXF2Q9BQY4 288 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 UGT2B28Q9BY64 529 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 MRPS30Q9NP92 439 aaKnown RBP3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 MIEF1Q9NQG6 463 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 PEF1Q9UBV8 284 aaKnown RBP3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 RSPH14Q9UHP6 348 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 NEU3Q9UQ49 428 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 PPIL1Q9Y3C6 166 aa3.54□□□□□ -1.84
HMGB1P23-201ENST00000518743 IGHV1OR15-1A0A075B7D0 117 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 ARPC4-TTLL3A0A0A6YYG9 625 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms