RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 OR52E2Q8NGJ4 325 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 OR6Q1Q8NGQ2 317 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 OR2G3Q8NGZ4 309 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 KIR2DL5BQ8NHK3 375 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 LINC01006Q8NI28 216 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 OR51E1Q8TCB6 317 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 ARPC1AQ92747 370 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 GTF2H4Q92759 462 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 ELSPBP1Q96BH3 223 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 SEH1LQ96EE3 360 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 SMIM10Q96HG1 83 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 CEP170P1Q96L14 293 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 COL21A1Q96P44 957 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 UTP23Q9BRU9 249 aaKnown RBP2.21□□□□□ -2.06
HERC4-215ENST00000515753 C1orf198Q9H425 327 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 UGT1A7Q9HAW7 530 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 UGT1A8Q9HAW9 530 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 PDFQ9HBH1 243 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 TMEM9BQ9NQ34 198 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 MS4A12Q9NXJ0 267 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 TMEM9Q9P0T7 183 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 ZNF629Q9UEG4 869 aaPredicted RBP2.21□□□□□ -2.06
HERC4-215ENST00000515753 CLEC2DQ9UHP7 191 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 MRM2Q9UI43 246 aaKnown RBP2.21□□□□□ -2.06
HERC4-215ENST00000515753 NEUROG3Q9Y4Z2 214 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 ATP6V1DQ9Y5K8 247 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 SIPA1L1O43166 1804 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 PTPRFP10586 1907 aa2.21□□□□□ -2.06
HERC4-215ENST00000515753 LAMA3Q16787 3333 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 SZT2Q5T011 3432 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 A0A1B0GUA9 196 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 TMEM213A2RRL7 107 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 ARL5CA6NH57 179 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 ANKRD65E5RJM6 399 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 DFFAO00273 331 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 NME4O00746 187 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 XKRYO14609 159 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 EMC8O43402 210 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 CDC40O60508 579 aaKnown RBP eCLIP2.2□□□□□ -2.06
HERC4-215ENST00000515753 CRTAPO75718 401 aaPredicted RBP2.2□□□□□ -2.06
HERC4-215ENST00000515753 TRAPPC6AO75865 159 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 LYPLA2O95372 231 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 GCGP01275 180 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 HOXC4P09017 264 aaPredicted RBP2.2□□□□□ -2.06
HERC4-215ENST00000515753 PNMA6AP0CW24 399 aaPredicted RBP2.2□□□□□ -2.06
HERC4-215ENST00000515753 IGHV3-43DP0DP04 118 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 IGFBP3P17936 291 aaPredicted RBP2.2□□□□□ -2.06
HERC4-215ENST00000515753 ATF6P18850 670 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 GGT1P19440 569 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 USF1P22415 310 aaPredicted RBP2.2□□□□□ -2.06
HERC4-215ENST00000515753 WARSP23381 471 aaKnown RBP2.2□□□□□ -2.06
HERC4-215ENST00000515753 PSMB6P28072 239 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 PFN2P35080 140 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 SERPINB8P50452 374 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 AP1S2P56377 157 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 TSPAN5P62079 268 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 SKP1P63208 163 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 RPS21P63220 83 aaKnown RBP2.2□□□□□ -2.06
HERC4-215ENST00000515753 LAMTOR4Q0VGL1 99 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 SMARCB1Q12824 385 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 PMS2P3Q13401 168 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 FZD2Q14332 565 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 MAPRE2Q15555 327 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 OR4D1Q15615 310 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 TAL2Q16559 108 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 KYAT1Q16773 422 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 NDUFAF6Q330K2 333 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 CHRFAM7AQ494W8 412 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 C5orf47Q569G3 176 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 LRRC10Q5BKY1 277 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 THEM4Q5T1C6 240 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 ZNF691Q5VV52 312 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 TEX43Q6ZNM6 134 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 RFLNAQ6ZTI6 216 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 OAFQ86UD1 273 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 RALGPS2Q86X27 583 aaPredicted RBP2.2□□□□□ -2.06
HERC4-215ENST00000515753 ZNF677Q86XU0 584 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 BLIDQ8IZY5 108 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 CBR4Q8N4T8 237 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 WDR31Q8NA23 367 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 CHST4Q8NCG5 386 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 OR10J6PQ8NGY7 276 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 ZNF461Q8TAF7 563 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 ERMNQ8TAM6 284 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 NEIL3Q8TAT5 605 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 FANK1Q8TC84 345 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 C7orf33Q8WU49 177 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 GEMIN6Q8WXD5 167 aaKnown RBP2.2□□□□□ -2.06
HERC4-215ENST00000515753 FGF13Q92913 245 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 TNFRSF14Q92956 283 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 FAM3DQ96BQ1 224 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 ZNF681Q96N22 645 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 SERPINB11Q96P15 392 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 SCGB3A2Q96PL1 93 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 TSNAXQ99598 290 aaKnown RBP2.2□□□□□ -2.06
HERC4-215ENST00000515753 CIB1Q99828 191 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 PAIP2Q9BPZ3 127 aaKnown RBP2.2□□□□□ -2.06
HERC4-215ENST00000515753 NRIP2Q9BQI9 281 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 TIMM29Q9BSF4 260 aa2.2□□□□□ -2.06
HERC4-215ENST00000515753 OR11A1Q9GZK7 315 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms