RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 OR56B1Q8NGI3 324 aa13.38□□□□□ -0.27
THUMPD3-210ENST00000515662 OR51S1Q8NGJ8 323 aa13.38□□□□□ -0.27
THUMPD3-210ENST00000515662 SNIP1Q8TAD8 396 aaKnown RBP13.38□□□□□ -0.27
THUMPD3-210ENST00000515662 RAB3CQ96E17 227 aa13.38□□□□□ -0.27
THUMPD3-210ENST00000515662 ZNF222Q9UK12 451 aa13.38□□□□□ -0.27
THUMPD3-210ENST00000515662 FAM230AA0A1W2PPH8 454 aa13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 PRAF2O60831 178 aa13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 RAB3DO95716 219 aa13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 PDGFAP04085 211 aa13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 SPINK2P20155 84 aa13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 FOXC1Q12948 553 aa13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 RBMS2Q15434 407 aaKnown RBP13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 PLAC9Q5JTB6 97 aa13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 CD276Q5ZPR3 534 aa13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 Q6ZS92 163 aa13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 OR10K1Q8NGX5 313 aa13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 NUDCD2Q8WVJ2 157 aa13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 APOBEC3DQ96AK3 386 aaPredicted RBP13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 IGKV1-27A0A075B6S5 117 aa13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 ZNF816-ZNF321PA0A0X1KG74 233 aa13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 A0A1B0GUH1 482 aa13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 ZNF736B4DX44 427 aaPredicted RBP13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 CD74P04233 296 aa13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 HIST1H1DP16402 221 aaKnown RBP13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 MGMTP16455 207 aa13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 MECP2P51608 486 aaKnown RBP13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 TMEM50BP56557 158 aa13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 ZBTB37Q5TC79 503 aa13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 OR11H4Q8NGC9 324 aa13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 CPNE2Q96FN4 548 aaPredicted RBP13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 S100A13Q99584 98 aa13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 REPIN1Q9BWE0 567 aaKnown RBP13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 KCNK7Q9Y2U2 307 aa13.37□□□□□ -0.27
THUMPD3-210ENST00000515662 M0QYG6 137 aa13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 SSX5O60225 188 aa13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 HPXP02790 462 aa13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 GSTP1P09211 210 aaKnown RBP13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 SERPINA2P20848 420 aa13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 RAD52P43351 418 aa13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 GK2Q14410 553 aaPredicted RBP13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 LHFPL2Q6ZUX7 228 aa13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 C9orf106Q8NAJ2 232 aa13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 OR51T1Q8NGJ9 327 aa13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 NANOS1Q8WY41 292 aaKnown RBP13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 WNT2BQ93097 391 aa13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 DACT3Q96B18 629 aaPredicted RBP13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 GINS4Q9BRT9 223 aa13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 TINAGL1Q9GZM7 467 aaPredicted RBP13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 NPDC1Q9NQX5 325 aaPredicted RBP13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 FOXI3A8MTJ6 420 aaPredicted RBP13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 PYCARD-AS1I3L0S3 204 aa13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 TMEM225BP0DP42 221 aa13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 ANXA7P20073 488 aaKnown RBP13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 RBP2P50120 134 aa13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 MDP1Q86V88 176 aa13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 OR4S1Q8NGB4 309 aa13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 PIGCQ92535 297 aa13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 TECTBQ96PL2 329 aa13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 TM2D1Q9BX74 207 aa13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 ELL3Q9HB65 397 aaPredicted RBP13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 KCNN3Q9UGI6 736 aa13.36□□□□□ -0.27
THUMPD3-210ENST00000515662 MED12LQ86YW9 2145 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 K7EM74 188 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 IGHV1-2P23083 117 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 MALLQ13021 153 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 ACSF3Q4G176 576 aaPredicted RBP13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 METTL11BQ5VVY1 283 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 MOB3CQ70IA8 216 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 GVQW1Q8N7I0 195 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 STEAP2Q8NFT2 490 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 PCNPQ8WW12 178 aaKnown RBP13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 BORCS8Q96FH0 119 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 ARHGAP5-AS1Q96IT6 56 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 ZNF75AQ96N20 296 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 MGAT4AQ9UM21 535 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 STARD10Q9Y365 291 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 OR14I1A6ND48 311 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 AHRRA9YTQ3 701 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 MFNGO00587 321 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 NGFP01138 241 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 ZNF735P0CB33 412 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 APLNRP35414 380 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 KIR2DL2P43627 348 aaPredicted RBP13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 FUT6P51993 359 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 PLCXD3Q63HM9 321 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 GLDNQ6ZMI3 551 aaPredicted RBP13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 PIAS4Q8N2W9 510 aaPredicted RBP13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 RBMXL3Q8N7X1 1067 aaKnown RBP13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 OR8H1Q8NGG4 311 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 MED30Q96HR3 178 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 SLC7A11Q9UPY5 501 aa13.35□□□□□ -0.27
THUMPD3-210ENST00000515662 SPRY1O43609 319 aaPredicted RBP13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 ANGPTL7O43827 346 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 RAD51DO75771 328 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 AMY2AP04746 511 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 IL5P05113 134 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 SERPINA5P05154 406 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 TGFBR3Q03167 851 aa13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 HLXQ14774 488 aaPredicted RBP13.34□□□□□ -0.27
THUMPD3-210ENST00000515662 PNLIPRP3Q17RR3 467 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms