RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 CCR4P51679 360 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 TDGF1P3P51864 188 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 RAB38P57729 211 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 RND3P61587 244 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 HLA-DRB3P79483 266 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 PCK2Q16822 640 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 C1orf140Q5VVS0 124 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 C1QL3Q5VWW1 255 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 C22orf15Q8WYQ4 148 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 LPAR5Q9H1C0 372 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 CDH20Q9HBT6 801 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 G6PC2Q9NQR9 355 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 LRRK1Q38SD2 2015 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 EDDM13A0A1B0GTR0 161 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 PRSS37A4D1T9 235 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 NDUFS8O00217 210 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 CYR61O00622 381 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 AMBPP02760 352 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 OPN1MWP04001 364 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 OPN1MW2P0DN77 364 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 OPN1MW3P0DN78 364 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 CDKN1BP46527 198 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 ERVFC1-1P60608 527 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 RAB35Q15286 201 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 ABLIM2Q6H8Q1 611 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 SLC16A14Q7RTX9 510 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 OR10A7Q8NGE5 316 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 KCNG3Q8TAE7 436 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 RBMXL1Q96E39 390 aaKnown RBP11.34□□□□□ -0.59
SMAD1-215ENST00000515385 ATG101Q9BSB4 218 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 HIPK2Q9H2X6 1198 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 CAPN10Q9HC96 672 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 MRPL22Q9NWU5 206 aaKnown RBP11.34□□□□□ -0.59
SMAD1-215ENST00000515385 EMC9Q9Y3B6 208 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 COL4A2P08572 1712 aa11.34□□□□□ -0.59
SMAD1-215ENST00000515385 FAM230AA0A1W2PPH8 454 aa11.33□□□□□ -0.6
SMAD1-215ENST00000515385 LNP1A1A4G5 178 aa11.33□□□□□ -0.6
SMAD1-215ENST00000515385 A6NIZ1 184 aa11.33□□□□□ -0.6
SMAD1-215ENST00000515385 H0YL77 283 aa11.33□□□□□ -0.6
SMAD1-215ENST00000515385 TSPAN2O60636 221 aa11.33□□□□□ -0.6
SMAD1-215ENST00000515385 C1QL1O75973 258 aa11.33□□□□□ -0.6
SMAD1-215ENST00000515385 SCAF4O95104 1147 aaKnown RBP11.33□□□□□ -0.6
SMAD1-215ENST00000515385 CTSDP07339 412 aaPredicted RBP11.33□□□□□ -0.6
SMAD1-215ENST00000515385 PTGER4P35408 488 aa11.33□□□□□ -0.6
SMAD1-215ENST00000515385 RAP1BP61224 184 aa11.33□□□□□ -0.6
SMAD1-215ENST00000515385 ZNF266Q14584 549 aa11.33□□□□□ -0.6
SMAD1-215ENST00000515385 HAGHQ16775 308 aa11.33□□□□□ -0.6
SMAD1-215ENST00000515385 TMEM176BQ3YBM2 270 aaPredicted RBP11.33□□□□□ -0.6
SMAD1-215ENST00000515385 FBXO42Q6P3S6 717 aa11.33□□□□□ -0.6
SMAD1-215ENST00000515385 TMEM182Q6ZP80 229 aaPredicted RBP11.33□□□□□ -0.6
SMAD1-215ENST00000515385 SLC25A26Q70HW3 274 aa11.33□□□□□ -0.6
SMAD1-215ENST00000515385 ZNF283Q8N7M2 679 aa11.33□□□□□ -0.6
SMAD1-215ENST00000515385 CPEB3Q8NE35 698 aaKnown RBP11.33□□□□□ -0.6
SMAD1-215ENST00000515385 OR52N4Q8NGI2 321 aa11.33□□□□□ -0.6
SMAD1-215ENST00000515385 OR5L2Q8NGL0 311 aa11.33□□□□□ -0.6
SMAD1-215ENST00000515385 OR5D14Q8NGL3 314 aa11.33□□□□□ -0.6
SMAD1-215ENST00000515385 OR2I1PQ8NGU4 316 aa11.33□□□□□ -0.6
SMAD1-215ENST00000515385 OR1P1Q8NH06 330 aa11.33□□□□□ -0.6
SMAD1-215ENST00000515385 CTDSP1Q9GZU7 261 aa11.33□□□□□ -0.6
SMAD1-215ENST00000515385 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.33□□□□□ -0.6
SMAD1-215ENST00000515385 WSB1Q9Y6I7 421 aa11.33□□□□□ -0.6
SMAD1-215ENST00000515385 EML5Q05BV3 1969 aa11.33□□□□□ -0.6
SMAD1-215ENST00000515385 IGLV1-36A0A0B4J1U3 117 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 TRDCB7Z8K6 153 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 HBE1P02100 147 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 OPN1LWP04000 364 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 PGA4P0DJD7 388 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 PGA5P0DJD9 388 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 GIMD1P0DJR0 217 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 PNLIPP16233 465 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 CCKARP32238 428 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 RBX1P62877 108 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 ELAVL3Q14576 367 aaKnown RBP11.32□□□□□ -0.6
SMAD1-215ENST00000515385 TAF9Q16594 264 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 IQCJQ1A5X6 159 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 PTCRAQ6ISU1 281 aaPredicted RBP11.32□□□□□ -0.6
SMAD1-215ENST00000515385 SPSB3Q6PJ21 355 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 PLXDC2Q6UX71 529 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 COX15Q7KZN9 410 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 ZNF761Q86XN6 746 aaPredicted RBP11.32□□□□□ -0.6
SMAD1-215ENST00000515385 ADPRHL1Q8NDY3 354 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 OR4N2Q8NGD1 307 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 ACY3Q96HD9 319 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 SNX22Q96L94 193 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 OR2A5Q96R48 311 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 OR8D2Q9GZM6 311 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.32□□□□□ -0.6
SMAD1-215ENST00000515385 EHFQ9NZC4 300 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 CRYM-AS1A6NIL9 109 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 ZNF705GA8MUZ8 300 aaPredicted RBP11.32□□□□□ -0.6
SMAD1-215ENST00000515385 FOXS1O43638 330 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 SCGB1D2O95969 90 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 IL18BPO95998 194 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 CYB5R3P00387 301 aaPredicted RBP11.32□□□□□ -0.6
SMAD1-215ENST00000515385 MBPP02686 304 aaPredicted RBP11.32□□□□□ -0.6
SMAD1-215ENST00000515385 CISD3P0C7P0 127 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 NOVA1P51513 510 aaKnown RBP11.32□□□□□ -0.6
SMAD1-215ENST00000515385 CSNK2A1P68400 391 aaPredicted RBP11.32□□□□□ -0.6
SMAD1-215ENST00000515385 ARFRP1Q13795 201 aa11.32□□□□□ -0.6
SMAD1-215ENST00000515385 FZD2Q14332 565 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms